Protein Info for ABZR86_RS01195 in Dyella japonica UNC79MFTsu3.2

Annotation: RICIN domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 515 signal peptide" amino acids 1 to 26 (26 residues), see Phobius details PF14200: RicinB_lectin_2" amino acids 378 to 454 (77 residues), 45 bits, see alignment E=1.5e-15 amino acids 460 to 514 (55 residues), 41 bits, see alignment 2.5e-14 PF00652: Ricin_B_lectin" amino acids 380 to 512 (133 residues), 57.3 bits, see alignment E=1.9e-19

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2ASL4 at UniProt or InterPro

Protein Sequence (515 amino acids)

>ABZR86_RS01195 RICIN domain-containing protein (Dyella japonica UNC79MFTsu3.2)
MHRIRSWWSCVLSVCLFACIGSAHAATGTVLQGSTLYPRVVRLEHGPANTYGRLIASTNG
IIFQSNDNGASWNLLGPVPTAPGSSERCCATLYELPQQVGSLAAGTLISAGSYFSGGNPA
VEVYISTNQGVSWTYHSTPALAADNNHGGLWEPEFSVASDGALVMFWSDETDPCCSQKLA
QIRSYNGSTWQDRTDTIRSTIQGDRPGMITVSKLPNGHYFMSNELCGPAACTVFSRTSTD
GWNYGDPTNMGTRVQTAAGQYLEHAPLNRWSPSVLSANGAILLVGQVMYESNGNVSASNG
KVLFANTNVDGSGNWYTIAAPVQVPGAYDNYCPNYSSALLPAADGSSILELASDYLNGGC
IVYFASEPWNRLPADGSTHALQSVQAPALCLDNTGWSTANNTSAELWDCNNLSVQNWTVH
AKGGGWFSIQNQATGLCVDNTGGSTSPGNLVTLWGCANNANQNWQFMDLGNGSYKLLNQA
SGSLILDDPAGSTTHGTQLQLWTDNGLAPQQWILH