Protein Info for ABZR86_RS01065 in Dyella japonica UNC79MFTsu3.2

Annotation: ATP-binding protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 860 signal peptide" amino acids 1 to 31 (31 residues), see Phobius details transmembrane" amino acids 40 to 61 (22 residues), see Phobius details PF00512: HisKA" amino acids 231 to 296 (66 residues), 70.8 bits, see alignment 1.2e-23 PF02518: HATPase_c" amino acids 343 to 458 (116 residues), 110.1 bits, see alignment E=1.2e-35 PF00072: Response_reg" amino acids 609 to 717 (109 residues), 70.1 bits, see alignment E=2.7e-23

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2CQ42 at UniProt or InterPro

Protein Sequence (860 amino acids)

>ABZR86_RS01065 ATP-binding protein (Dyella japonica UNC79MFTsu3.2)
MPTTLRRFSSRLAFPRPAAAAFALAWVDSAVDNQAVPVTGATLMLAGLLILVAVAAMALA
WRLHGQAGRLRDTEHELAAERAARRADQGLSEVVQHIPVVVFALRRDADGTRHVTFSAGD
VQALFGVDTGELLRDGDVLQERPLRERIHPDDADAFLALISPIGDDPAPRSLDFRAFGAG
GLRWIHAMLAPRALPEGRLGVAGYFIDTTELNARNEALRIARDVAERASKAKADFLATMS
HEIRTPMNGVIGMLELLGRTPINAEQRELLHAVEDSAGVLLQVLNDILDFSKLEAGDLRL
DDSAFDPRVLADNVVSVLAARAQAKGLAIRLAVDATVAGALRGDSVRLRQILLNLLSNAI
KFTERGSISVRLMVLGDDGARQQLRLSVSDTGIGIAKDKQAQLFNPFTQAEASTSRRYGG
TGLGLAICRHLATLMDGSVELDSEPGAGTTVTFDLRLPVERREATAPSALRGRHAVVRLA
APDTAAALGEQLKSLGLTVELTPPEQPLRAGMAASLLFVAPEDRLSETQISSHVVAVTDE
AIASGGLAQRGERWFLSANPLRWQALLRACLGALELRDEAYREAAATAQDDPAATPAPLP
ALPAHRGYILVAEDHPVSQQLIQRQLAVLGLDCDVVDNGADAFDALSGHDYALLLTDCNM
PGLSGYELATAWRRHEAESRAARRLPIIAMTANALAGEAVRVREAGMDDVLAKPLQLLPL
SQVLGRWLPEAGIATAATNPADARPGRAAPPAGIPAVGDSPALHADMLRAFTSASRDDLR
ELRRSVEHGDPAAAALGLHRLLGALQLFDDGPLLGQGRQLLEALHGPAAPDTLARLPGYA
AEVERLLAKLNRLPADQGVG