Protein Info for ABZR86_RS00775 in Dyella japonica UNC79MFTsu3.2

Annotation: peroxiredoxin

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 153 PF00578: AhpC-TSA" amino acids 5 to 131 (127 residues), 133.7 bits, see alignment E=3.4e-43 PF08534: Redoxin" amino acids 5 to 133 (129 residues), 64.2 bits, see alignment E=1.2e-21

Best Hits

Swiss-Prot: 59% identical to BCP_XANCP: Peroxiredoxin Bcp (bcp) from Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25)

KEGG orthology group: K03564, peroxiredoxin Q/BCP [EC: 1.11.1.15] (inferred from 63% identity to bpy:Bphyt_1796)

MetaCyc: 38% identical to thiol peroxidase (Escherichia coli K-12 substr. MG1655)
1.11.1.15-RXN [EC: 1.11.1.24]

Predicted SEED Role

"Thiol peroxidase, Bcp-type (EC 1.11.1.15)" in subsystem Thioredoxin-disulfide reductase (EC 1.11.1.15)

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 1.11.1.15

Use Curated BLAST to search for 1.11.1.15 or 1.11.1.24

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2CKS7 at UniProt or InterPro

Protein Sequence (153 amino acids)

>ABZR86_RS00775 peroxiredoxin (Dyella japonica UNC79MFTsu3.2)
MPDLGKKIPKLKGALGDGGELKLDSLKGQWVVVYFYPKDSTPGCTNEAKDFRDLYPKFRK
RNAQVLGVSRDSVKSHANFAARQELPFPLVSDPEETWCQAFDVIHEKVLYGKRHMGVVRS
SFLIDPEGRLVQEWRNVKVPGHAQAVLDAIPAK