Protein Info for ABZR86_RS00650 in Dyella japonica UNC79MFTsu3.2

Annotation: TonB-dependent receptor

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 803 signal peptide" amino acids 1 to 23 (23 residues), see Phobius details PF07715: Plug" amino acids 154 to 243 (90 residues), 49.9 bits, see alignment E=4.1e-17 PF00593: TonB_dep_Rec" amino acids 345 to 772 (428 residues), 153.1 bits, see alignment E=2.4e-48

Best Hits

Predicted SEED Role

"Ferrichrome-iron receptor" in subsystem Iron acquisition in Vibrio or Transport of Iron

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2CG51 at UniProt or InterPro

Protein Sequence (803 amino acids)

>ABZR86_RS00650 TonB-dependent receptor (Dyella japonica UNC79MFTsu3.2)
MGRFGWLFACGCMVASPWTSRAAAANDDSAVQARLRFAIPAQPLASALIAYGSQANVQVL
VSGQLAAALRSAPVQGELAREDALAQLLRDTTLTYRYIGATTVVIRPASAPASHAETPPV
PVTDLAPVRAVGLFAEGYRADFANGSVRMDADPADLPQSIGLVTRDLMDARQDRTVPDAL
RTVAGVQYLDTNVGLPQFFIRGFRTGNGLTDGMPNAVVGVGDLPPLVAVERIEVPRGPQS
ILGDVSANNNFGGLVGLVMKKPQATPVHRLSWALGSHGDTQLDGDFAGKLDGDGRWLYRA
VFSLDRTDLTPQGYAGRRTNYVAPSLGWNGRDTQWIVGLSRMVNRFPMPDHVAWSDGTPS
SATPPGLLLGNAQDHAQFRTTRYYYLFEHAFDDTWSLRSRAQYVHESSMQQAWWVFFSPY
DQSAFALADKYRYTDAFYTLQNELVAAFELGATRHKVMLGFDYSRARVGRFEDVQATVGD
GSVDILGGERLPPVDSLTSDQVVHPFGASKFAFSGNPWITDSGLFLQDQIQLGERWNALV
AIRRSAYVLETEHLDGRPWTRRKAEWVPNLGLVYKPRPGVALYASLSHGFQPDTVLGKNG
KPLLPALSRQLEAGAKFDLAQDRARLTVAWYRIMLDRSTDLFSPKPPYFGYRGPGQTNQG
FEAELNGRLAPGLDVSASYTYARVRKHDGAPVPGAPRHRFDAWTSYTFDPAARASWGIGA
GVHARSSAISLLDGNWFGTDRLTFRNPGQYSLDANIFYRAPRWSVTLGVRNLLGRQLRAE
DFDDSFVPLVERRSVLLSGSYDF