Protein Info for ABZR86_RS00370 in Dyella japonica UNC79MFTsu3.2

Annotation: aromatic ring-hydroxylating dioxygenase subunit alpha

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 361 PF00355: Rieske" amino acids 43 to 131 (89 residues), 61.9 bits, see alignment E=4.5e-21 PF00848: Ring_hydroxyl_A" amino acids 179 to 356 (178 residues), 127.7 bits, see alignment E=5.8e-41

Best Hits

Predicted SEED Role

"Benzoate 1,2-dioxygenase (EC 1.14.12.10)" (EC 1.14.12.10)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 1.14.12.10

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2CB85 at UniProt or InterPro

Protein Sequence (361 amino acids)

>ABZR86_RS00370 aromatic ring-hydroxylating dioxygenase subunit alpha (Dyella japonica UNC79MFTsu3.2)
MTELLSPDVLAPQALDHALALSARFYTHAAAPALDTRAVFARSWQLVGHRAQLAETGDHL
VTQIAGLPLLIVRSDEQTIRAFHNVCRHRAGPIASCDGKGAKALRCRYHGWTYGLDGVLR
GAPEMGRTPDFDPAQIRLPEVRVQVWQGLVFVAVGEAPPFEHFVEGIDQRLGPGRRLSDF
EFHHRVGYDVACNWKVYVDNYLEGYHVPHIHPGLNSLLDYRSYITETAEWYSYQFSPLES
ASDLYGSGEALYYFLYPNAMLNILPGRLQTNRVLPLGVDRCRVEFDFYYAPEPGDAAQAR
RAADIAFSDEVQVEDVTICEDVQRGLASGSYEAGRLNPLRENAVHHFHELLRRAYRESAH
A