Protein Info for ABZR86_RS00185 in Dyella japonica UNC79MFTsu3.2

Annotation: beta-propeller fold lactonase family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 394 signal peptide" amino acids 1 to 29 (29 residues), see Phobius details PF21783: YNCE" amino acids 33 to 376 (344 residues), 84.2 bits, see alignment E=1.8e-27 TIGR02276: 40-residue YVTN family beta-propeller repeat" amino acids 66 to 101 (36 residues), 46 bits, see alignment 1.9e-16 PF10282: Lactonase" amino acids 171 to 304 (134 residues), 22.9 bits, see alignment E=7.2e-09

Best Hits

KEGG orthology group: None (inferred from 79% identity to bvi:Bcep1808_7268)

Predicted SEED Role

"surface antigen gene"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1I2C8C6 at UniProt or InterPro

Protein Sequence (394 amino acids)

>ABZR86_RS00185 beta-propeller fold lactonase family protein (Dyella japonica UNC79MFTsu3.2)
MSRSLRAPRLATFASALAGLGLSLAAQAAPPVQTVAGMPAVVNPANMYTEARAGNFSPAV
KGALERIYVPNLRSDTVSVIDPATYKVIDTLPVGRSPQHVVPAWDLQTLWVTNNAEGRSD
GSLTPIDPKTGKAGKAIEVDDPYNMYFTPDGKEAIVVAEAHARLDFRDAHTMQLHNSLDA
PQCKGINHADFSIDGHYAIFTCEFGGKLVKIDMVKRKVLGYLDLDAKGMPQDIRVSPDGK
VFYVADMMADGVFMVDGDSFTKIGFVKTGIGTHGLYPSRDGSKLYVANRGSNHVHGERRG
NKKGVNKGSVSVIDFATRQVVANWPIPGGGSPDMGNVSADGKTLWLSGRYDDLVYAFDTA
TGAVRKIKVGAEPHGLAVWPQPGRYSLGHTGIMR