Protein Info for ABIE53_005256 in Paraburkholderia graminis OAS925

Annotation: D-inositol-3-phosphate glycosyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 382 PF13579: Glyco_trans_4_4" amino acids 22 to 194 (173 residues), 96.2 bits, see alignment E=6.8e-31 PF13439: Glyco_transf_4" amino acids 22 to 198 (177 residues), 104.8 bits, see alignment E=1.3e-33 PF20706: GT4-conflict" amino acids 113 to 330 (218 residues), 43.1 bits, see alignment E=7.1e-15 PF00534: Glycos_transf_1" amino acids 205 to 330 (126 residues), 78.5 bits, see alignment E=1.2e-25 PF13692: Glyco_trans_1_4" amino acids 219 to 330 (112 residues), 52.3 bits, see alignment E=1.9e-17

Best Hits

Predicted SEED Role

"Glycosyl transferase, group 1"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (382 amino acids)

>ABIE53_005256 D-inositol-3-phosphate glycosyltransferase (Paraburkholderia graminis OAS925)
MKIALISEHASPLAVAGGVDSGGQNIYVANVARELTEMGHQVDVFTRRDRALLPLISDMD
GVRVIHVPAGPPMQLPKERLLPFMDEFAAFLIEFFRGEKTPYDVMHANFFMSGLAALKVK
AALGVPLVTTFHALGRVRRIHQGANDGFPDERFAIEDDLVAQSDVVIAECPQDEADLIEH
YRADPARIQTVPCGFDADEFHPMDRATAREALGWQQDQFTVLQLGRLVERKGIDNVVRGV
GVLKQAFSASAELYIVGGNSDAPNEKATPEIARLRGIARDCGVAGQTHFVGRRGRAQLRY
FYSAADVFVTTPWYEPFGITPVEAMACGTPGDRRGRRRNPLFGGGRHHRVPCAAARSGCA
GRASRPVAARSRARSPDGRSGP