Protein Info for ABIE53_004737 in Paraburkholderia graminis OAS925

Annotation: putative Mg2+ transporter-C (MgtC) family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 228 transmembrane" amino acids 7 to 24 (18 residues), see Phobius details amino acids 36 to 56 (21 residues), see Phobius details amino acids 71 to 89 (19 residues), see Phobius details amino acids 96 to 115 (20 residues), see Phobius details amino acids 118 to 138 (21 residues), see Phobius details PF02308: MgtC" amino acids 11 to 140 (130 residues), 136 bits, see alignment E=4.4e-44

Best Hits

KEGG orthology group: K07507, putative Mg2+ transporter-C (MgtC) family protein (inferred from 92% identity to bxe:Bxe_B2948)

Predicted SEED Role

"Mg(2+) transport ATPase protein C"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (228 amino acids)

>ABIE53_004737 putative Mg2+ transporter-C (MgtC) family protein (Paraburkholderia graminis OAS925)
MLGNFDLISRLVLAAALGSVIGFERERLSWAAGLRTHMLVCVGSALIMIVSAYGFAEVLT
GEHVVLDPSRMAAQVVSGIGFLGAGSILLRGEIVRGLTTAASLWSVAAIGLAVGGGLYTA
SIAATVIILIILAGIKPLERRFITVKQRRQVTMLVERGTLTFHSLHDELGAASPRVKQFV
MQQSDETPECDEVMITLHRVSSVEYEAICTRLRQLQGVREFRQDDASG