Protein Info for ABIE53_004258 in Paraburkholderia graminis OAS925

Annotation: beta-alanine--pyruvate transaminase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 442 PF00202: Aminotran_3" amino acids 25 to 436 (412 residues), 294.2 bits, see alignment E=1.4e-91 PF00155: Aminotran_1_2" amino acids 203 to 349 (147 residues), 24.5 bits, see alignment E=1.5e-09

Best Hits

Swiss-Prot: 52% identical to BAUA_PSEAE: Beta-alanine--pyruvate aminotransferase (bauA) from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)

KEGG orthology group: K00822, beta-alanine--pyruvate transaminase [EC: 2.6.1.18] (inferred from 97% identity to bgf:BC1003_5131)

Predicted SEED Role

"Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18)" in subsystem Pyruvate Alanine Serine Interconversions (EC 2.6.1.18)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.6.1.18

Use Curated BLAST to search for 2.6.1.18

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (442 amino acids)

>ABIE53_004258 beta-alanine--pyruvate transaminase (Paraburkholderia graminis OAS925)
MTSRPVIDDLSSFWMPFTANRQFKAAPRLLESAKGMYYRSTDGREVLDGCAGLWCVNAGH
SRDEIVAAITKQLSTLDFAPTFQMGHPLAFEAATRVAELMPEGLDRIFFTNSGSESVDTA
LKIALAYHRSRGEAQRTRLIGRERGYHGVGFGGISVGGIAPNRKTFSGALLPAVDHLPHT
HNLEQNAFSKGQPAWGAHLADELERIVALHDASTIAAVIVEPVAGSTGVLIPPQGYLQKL
RDICTKHGILLIFDEVITGFGRVGKATASEYFGVTPDLITMAKAINNASIPMGAVAASRT
VHDTIVNGGAQGAIELFHGYTYSAHPAAVAAAIATLDLYRSEGLFERAASLAPTFEAAVH
SLRGAKHVKDIRNLGMIAGIELESRDGAPGARAYEAFVKCFEAGVLVRFTGDILAFSPPL
IINEEQIAHLFKTVGDVLATVQ