Protein Info for ABIE53_003901 in Paraburkholderia graminis OAS925

Annotation: AAHS family 4-hydroxybenzoate transporter-like MFS transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 456 transmembrane" amino acids 29 to 49 (21 residues), see Phobius details amino acids 72 to 91 (20 residues), see Phobius details amino acids 99 to 119 (21 residues), see Phobius details amino acids 125 to 145 (21 residues), see Phobius details amino acids 157 to 179 (23 residues), see Phobius details amino acids 186 to 207 (22 residues), see Phobius details amino acids 262 to 287 (26 residues), see Phobius details amino acids 303 to 324 (22 residues), see Phobius details amino acids 331 to 352 (22 residues), see Phobius details amino acids 358 to 384 (27 residues), see Phobius details amino acids 397 to 419 (23 residues), see Phobius details amino acids 425 to 445 (21 residues), see Phobius details PF07690: MFS_1" amino acids 38 to 344 (307 residues), 111.1 bits, see alignment E=8.8e-36 PF06779: MFS_4" amino acids 56 to 209 (154 residues), 33.4 bits, see alignment E=5.1e-12 PF00083: Sugar_tr" amino acids 66 to 437 (372 residues), 71.2 bits, see alignment E=1.3e-23

Best Hits

KEGG orthology group: None (inferred from 73% identity to bxe:Bxe_B2519)

Predicted SEED Role

"4-hydroxybenzoate transporter" in subsystem Cinnamic Acid Degradation or Gentisare degradation or Phenylpropanoid compound degradation or Salicylate and gentisate catabolism or p-Hydroxybenzoate degradation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (456 amino acids)

>ABIE53_003901 AAHS family 4-hydroxybenzoate transporter-like MFS transporter (Paraburkholderia graminis OAS925)
MTVLPESASAVAPAVDITALIERQKLRGFSLGLIAWCFVIVLIDGYDQVAAAYAAPTLVR
AWHVKATEFGHVFGYGLVGVLVGSLLLGFLGDRIGRRLTIIYGVLWFGILTLACSRAASL
DQLTVLRFVAGIGMGGVVPNTVALVSEYAPKARRATWITLMFSGFSIGAGGGGAIASWML
PRFGWPVLFEVGGVAAIAVALVSFAVLPESVRFLILRGRAPREVARIARRLGSDSVFNDA
ENQAARYIVQDEKRIRATPLALFGNGLVRVTPLLWALFVLNSLALHFLQNWLPILFSMSA
LPAAQAAKAAMMFPVGGTVGALALCRCVDRYGIAVILLLALVGLPVCISLGMPMPALWLY
GASFMSGVCVIGSQFALYAVAGMLYPTMLRSAGVGSAIGIGKLGSVIGSVLGGVLLAMHW
PVADLFMNVSGVFIFIALLSVWLGWNRRRAASQSIA