Protein Info for ABIE53_003614 in Paraburkholderia graminis OAS925

Annotation: cell division protein FtsW

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 423 transmembrane" amino acids 53 to 76 (24 residues), see Phobius details amino acids 88 to 111 (24 residues), see Phobius details amino acids 120 to 140 (21 residues), see Phobius details amino acids 185 to 204 (20 residues), see Phobius details amino acids 210 to 227 (18 residues), see Phobius details amino acids 233 to 252 (20 residues), see Phobius details amino acids 311 to 336 (26 residues), see Phobius details amino acids 353 to 373 (21 residues), see Phobius details amino acids 389 to 410 (22 residues), see Phobius details TIGR02614: cell division protein FtsW" amino acids 51 to 413 (363 residues), 414.3 bits, see alignment E=2.1e-128 PF01098: FTSW_RODA_SPOVE" amino acids 53 to 415 (363 residues), 351.6 bits, see alignment E=2.3e-109

Best Hits

Swiss-Prot: 84% identical to FTSW_BURTA: Probable peptidoglycan glycosyltransferase FtsW (ftsW) from Burkholderia thailandensis (strain ATCC 700388 / DSM 13276 / CIP 106301 / E264)

KEGG orthology group: K03588, cell division protein FtsW (inferred from 95% identity to bug:BC1001_3110)

Predicted SEED Role

"Cell division protein FtsW" in subsystem Bacterial Cell Division or Bacterial Cytoskeleton

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (423 amino acids)

>ABIE53_003614 cell division protein FtsW (Paraburkholderia graminis OAS925)
MSWSERFGSRTGAGAGDTANAARVGGRTGGSGLASAVNGVRPLRSRMLDYDHSLLWVVVA
LLGLGVVMVYSASIAMPDSPKYASYRDYAFLVRQIIFVTMGAVVGVIAFRIPISTWDKYA
PKLFLIALVALVIVLIPHVGKGVNGARRWIPLGITNMQPSEIMKLAVTIYAANYTVRKQE
YMHSFAKGFLPMAMAVGFVGALLLLEPDMGAFMVIAAIAMGLLFLGGVNGKLFGGLVATA
VGTFSLLVWASPWRRERIFAYLDPWDDRYAQGKAYQLTHSLIAFGRGEWFGVGLGGSVEK
LNYLPEAHTDFILAVIGEELGFVGVLIVIVMFYWIVRRAFEIGRQALALDRTFAGLVAKG
VGIWFGAQTFINMGVNLGLLPTKGLTLPLVSYGGSGIVQNCIAIAVLLRVDYENRVLMRG
GKV