Protein Info for ABIE53_001979 in Paraburkholderia graminis OAS925

Annotation: peptidoglycan/LPS O-acetylase OafA/YrhL

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 438 transmembrane" amino acids 32 to 51 (20 residues), see Phobius details amino acids 71 to 89 (19 residues), see Phobius details amino acids 102 to 123 (22 residues), see Phobius details amino acids 143 to 163 (21 residues), see Phobius details amino acids 197 to 250 (54 residues), see Phobius details amino acids 256 to 274 (19 residues), see Phobius details amino acids 283 to 301 (19 residues), see Phobius details amino acids 307 to 331 (25 residues), see Phobius details amino acids 343 to 361 (19 residues), see Phobius details amino acids 373 to 395 (23 residues), see Phobius details PF01757: Acyl_transf_3" amino acids 66 to 388 (323 residues), 83.7 bits, see alignment E=6.4e-28

Best Hits

KEGG orthology group: None (inferred from 74% identity to bgf:BC1003_0974)

Predicted SEED Role

"acyltransferase 3"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (438 amino acids)

>ABIE53_001979 peptidoglycan/LPS O-acetylase OafA/YrhL (Paraburkholderia graminis OAS925)
MPALEPLKSLPIHVDSSAPILRKIWDMGLYNIAPYFVVMAALCCLFALPIFRFVDTVGGD
SGRVVTIDGLRGFLALSVMIYHGLISYNYQANGQWIASDSLFYRPLGGVAVMLFFMITAY
LFWTRLLKRDGRPDWKGLYIGRLFRIGPLYVFSILAMTLIVFWRTGFELREPLDSMVSNL
GRWFALGLNDDMKPINGFPWTIFILMGVTWSIKYEWWFYFSLIITAIFIQLRMHLTFAVV
GLAASFALILTTQSDLWCLPAAFFCGILTASLLHEGIKPRLSANWMSIMALTALAIMFSF
ARTHAGVIQIALIGIAFYLICSGADLFGLLLLRPAQRMGHISYGIYLLQGIPLTLLFWHA
PFKAWALFSPTHYWTALLICAAVLCVAASITFAAIERPFIELGKSLTRIGKRDAVKIEPT
QSPQSVGSMMNKNQKYKR