Protein Info for ABIE53_001670 in Paraburkholderia graminis OAS925

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 489 PF18476: PIN_8" amino acids 24 to 261 (238 residues), 218 bits, see alignment E=1.7e-68

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (489 amino acids)

>ABIE53_001670 hypothetical protein (Paraburkholderia graminis OAS925)
MRKAFAGFYQPTSDDLVGLWREAVFVLDANVLLSLYRYPQQARDDLFKVLESIADRLWIP
FNVALEFQRNRVSVIAGENAKFEETVEQLDAAESKLVQAVEKLELDRRGLGIDTAPLRES
LKGAIQEIRSAVSAGKSRQLAISHDDEVRERLETILGDNVGPPPENQAAVNAFVSDGEAR
YERKIPPGFKDAAKGRNPADAKFFHDGIKYPSEYGDLIVWRQVIAHAKNSSLRKVIFVTN
DKKEDWWLRESGKTLGPQPQLIQEIRREAGVEAFWMYAVDQFLVHARRFLNAEIDESSVT
EVREVAAQDVAQVSEASSGADEPIELLSVLRLMNSGVSHSYVSRFAKSRKNRRSMYSTTG
QDVPSVVRQAVLAWVQDQRLPDETVDTRFGRFPEFILRDEAKARGIHCVYDDMRGMETNL
LGLFLDCTMEVTSKSYATFTIAFVSMPFTDGLSSALRKKAVEYASISPAIKCVFLQFDDS
FKISEGAGT