Protein Info for ABIE53_001227 in Paraburkholderia graminis OAS925

Annotation: uncharacterized protein (DUF934 family)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 185 PF06073: DUF934" amino acids 61 to 167 (107 residues), 150 bits, see alignment E=9.7e-49

Best Hits

KEGG orthology group: None (inferred from 93% identity to bgf:BC1003_0838)

Predicted SEED Role

"Oxidoreductase probably involved in sulfite reduction"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (185 amino acids)

>ABIE53_001227 uncharacterized protein (DUF934 family) (Paraburkholderia graminis OAS925)
MASIIKNRAIVNDDWTLVRPAEDGSLPAVNELPAGKIIVPLAFWQAERDALSASRGAAEL
GVWLAPDSEPADIAGDFDKLAVIAVDFPVFRDGRGYSIGRLLRERYGYKGELRAIGDVLR
DQVRLMLRCGFDAFAVRADKDISDAIKAFDDFTVQYQGAFDEPAPLFRRRAASASSSAAS
QKVSA