Protein Info for ABIE53_001162 in Paraburkholderia graminis OAS925

Annotation: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 340 signal peptide" amino acids 1 to 27 (27 residues), see Phobius details transmembrane" amino acids 64 to 91 (28 residues), see Phobius details amino acids 103 to 121 (19 residues), see Phobius details amino acids 127 to 146 (20 residues), see Phobius details amino acids 153 to 172 (20 residues), see Phobius details amino acids 179 to 196 (18 residues), see Phobius details amino acids 203 to 225 (23 residues), see Phobius details amino acids 231 to 255 (25 residues), see Phobius details amino acids 280 to 300 (21 residues), see Phobius details amino acids 306 to 327 (22 residues), see Phobius details PF00953: Glycos_transf_4" amino acids 80 to 220 (141 residues), 102.2 bits, see alignment E=1.5e-33

Best Hits

KEGG orthology group: None (inferred from 82% identity to bgf:BC1003_0776)

Predicted SEED Role

"Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)" in subsystem Methicillin resistance in Staphylococci or Teichoic and lipoteichoic acids biosynthesis (EC 2.7.8.-)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.7.8.-

Use Curated BLAST to search for 2.7.8.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (340 amino acids)

>ABIE53_001162 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase (Paraburkholderia graminis OAS925)
MLRYLASLPAWSAAVLIGLGAACACAAILWTLLRTGLAWRLATDVPNDRSLHHAPTPRVG
GWGIVPVSVAAMLLLAPALWCAALGTAFLAAVSQIDDRRGLPARVRFAAHLVAVVGLVAA
FPASVPWWALGVLAFLMLWLVNLYNFMDGADGLAGGMALFGFAGYAVAALLSERPLPELA
WSSVAVSGAALGFLVFNFHPARVFLGDAGSISLGFLAGAFGYWGWRGGVWPVWFPVMVFA
PFIADASVTLACRLLRGEKFWEAHREHYYQRMVRSGIGHAKTALAWYALMVTGTTLAIIT
LGRATVFQWCIVTAWVIVLFLAGVVIDMRWRHFQSTRSDK