Protein Info for ABIE53_001047 in Paraburkholderia graminis OAS925

Annotation: SulP family sulfate permease

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 719 signal peptide" amino acids 1 to 21 (21 residues), see Phobius details transmembrane" amino acids 30 to 49 (20 residues), see Phobius details amino acids 60 to 79 (20 residues), see Phobius details amino acids 86 to 109 (24 residues), see Phobius details amino acids 121 to 142 (22 residues), see Phobius details amino acids 159 to 178 (20 residues), see Phobius details amino acids 186 to 210 (25 residues), see Phobius details amino acids 258 to 278 (21 residues), see Phobius details amino acids 290 to 310 (21 residues), see Phobius details amino acids 321 to 340 (20 residues), see Phobius details amino acids 346 to 370 (25 residues), see Phobius details amino acids 382 to 415 (34 residues), see Phobius details amino acids 447 to 465 (19 residues), see Phobius details PF00916: Sulfate_transp" amino acids 25 to 368 (344 residues), 123.1 bits, see alignment E=1.9e-39 PF01740: STAS" amino acids 456 to 539 (84 residues), 30.5 bits, see alignment E=3.9e-11 PF00027: cNMP_binding" amino acids 597 to 680 (84 residues), 69 bits, see alignment E=4.2e-23

Best Hits

KEGG orthology group: None (inferred from 75% identity to bph:Bphy_5025)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (719 amino acids)

>ABIE53_001047 SulP family sulfate permease (Paraburkholderia graminis OAS925)
MVSMLVMLCYAMSLGTMIFSADLARYAGLGVPTALISCVVTALVIALMSSMRMNIAGPDG
NATAFLAGVAAGVASSVRADGGTPQTILLTVLIAIALCSVVTGIILYAVGSSRRSRSLQF
LPYPVVGGFLAGTGYLLLAGAFRVVTGEPLNWHTLALLTHLNWLWTPALLVCASATLLSR
TWKHAAVLPITLALGVALFYVLLFAAGLSIDDARDTRLLLPRVTPHAMRIPEMHLPASLA
HGKVDWSAIGAHLPETLVVTSISAISILMNSTAIGAATGEDIDLNREMRAAGIANIASGM
LGGMVGYQSFNRSMLNARAGATSRLAGVFAALACLFVLAVSPDLVALFPVPVLVGLQLFM
GVRLLIQWLVGAYRKLDWHEYLLVPLILGAIALYGVVTGVVAGVIAACVMFALLYGRVSC
VRMEFDGSTRTSTVERSIEATERLHALGAQVCGTCLQGFLFFGTANSILQRVRERLATRG
PVPVRFVVLDFASTNGMDASVSVSFVKLWQLCATIDADLVLTGLPIRSRELLMMTGTLNL
RIHEFSTLDVGLEWIEDTLLASDSRALPRAEEDFHAMLAPYFTSPALARLLSLLEVRELG
AGQPVFRRGEPGDAMYFVESGRVTVLLPLANGRNLRLRSFGPGTVVGEMAVYTQQARSAD
VLAEGPARVLRLTLESLHALERDDPVTVQQIHRFVVKVMASRLTVADEALRAAHFVPGG