Protein Info for ABIE53_000949 in Paraburkholderia graminis OAS925

Annotation: peptidoglycan/LPS O-acetylase OafA/YrhL

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 382 transmembrane" amino acids 20 to 38 (19 residues), see Phobius details amino acids 58 to 76 (19 residues), see Phobius details amino acids 96 to 116 (21 residues), see Phobius details amino acids 137 to 158 (22 residues), see Phobius details amino acids 165 to 188 (24 residues), see Phobius details amino acids 200 to 219 (20 residues), see Phobius details amino acids 231 to 251 (21 residues), see Phobius details amino acids 258 to 277 (20 residues), see Phobius details amino acids 284 to 305 (22 residues), see Phobius details amino acids 325 to 346 (22 residues), see Phobius details PF10129: OpgC_C" amino acids 14 to 120 (107 residues), 25.7 bits, see alignment E=5.4e-10 PF01757: Acyl_transf_3" amino acids 17 to 333 (317 residues), 89.9 bits, see alignment E=1.7e-29

Best Hits

KEGG orthology group: None (inferred from 90% identity to bug:BC1001_0532)

Predicted SEED Role

"Lysophospholipid acyltransferase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (382 amino acids)

>ABIE53_000949 peptidoglycan/LPS O-acetylase OafA/YrhL (Paraburkholderia graminis OAS925)
MKLFGGTGPAKARRAIELDFVRGIAIIAVMGFHFRTVHTSNVLVQIIEYPLKSFGREGVN
LFFTLSGFLVGGLLLRQYAETGHVDARRFIVRRMFRIWPAYYVLIIFHMLAGRHPWNTFL
FQNLTHLQNYFGTSITQTWSLAVEEHFYLVLPALLLLFSRLRLGAWTIIGVLSGICAVTL
IARCFAVADGDLQGAFAYTQYRIDSLLIGVILSAIYWMKPGIYHQIAKRKWLLVGCVGLL
CAWLALATKHIVLDESIGYTIQALGFAALIVFVLEYSGSLRTTWIYRGVAWVGLYSYGIY
LWHSLALAPGEMLIRKATALGFAPSIIWIVALSAQFVIAIGIGYVTTRAIEYPFMLMRNA
LFPEKRSSSVREEVPVAGGQLS