Protein Info for ABIE53_000939 in Paraburkholderia graminis OAS925

Annotation: capsular exopolysaccharide synthesis family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF13807: GNVR
  • amino acids 2 to 40 (39 residues), 28.8 bits, 1.4e-10
• TIGR01007: capsular exopolysaccharide family
  • amino acids 99 to 294 (196 residues), 142.7 bits, E=5.4e-46
• PF13614: AAA_31
  • amino acids 118 to 239 (122 residues), 43.4 bits, E=5.5e-15

Predicted SEED Role

"Tyrosine-protein kinase Wzc (EC 2.7.10.2)" in subsystem Colanic acid biosynthesis (EC 2.7.10.2)

KEGG Metabolic Maps

• T cell receptor signaling pathway

Isozymes

Compare fitness of predicted isozymes for: 2.7.10.2

Use Curated BLAST to search for 2.7.10.2

Protein Sequence (309 amino acids)

>ABIE53_000939 capsular exopolysaccharide synthesis family protein (Paraburkholderia graminis OAS925)
MVDFAEAPDEPVRPKRVIAILIALGGGLVLGIMLTFFKRAMYGGVERPDELEAVLGVPVF
AVVPRSQTQLRLQEDVMLRRRGLHVLAQQAPEDIAVEGVRNLRTSLQLSLDHAANNVVMI
TGSRPDAGKSFLSVNLAALVASANKRVLIIDGDMRRGDVHSHFGIGHQPGLSDVLSGGDL
TSMIQRDVLPGLDVLAKGTLPSHPSELLMSSRFQTMLDELKSRYDLVIIDTPPVLAVTDS
TLIGKHAGTTLLVVRHGRHPLNEIAETAKRLRNGGVGLRGVLLTDVPQEGAFLGSGYQGG
YYGYDSIAG