Protein Info for ABIE53_000147 in Paraburkholderia graminis OAS925

Annotation: sugar O-acyltransferase (sialic acid O-acetyltransferase NeuD family)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 258 PF17836: PglD_N" amino acids 42 to 120 (79 residues), 65 bits, see alignment E=7.3e-22 TIGR03570: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family" amino acids 42 to 246 (205 residues), 199.3 bits, see alignment E=2.6e-63

Best Hits

KEGG orthology group: None (inferred from 64% identity to bcm:Bcenmc03_0218)

Predicted SEED Role

"transferase hexapeptide repeat"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (258 amino acids)

>ABIE53_000147 sugar O-acyltransferase (sialic acid O-acetyltransferase NeuD family) (Paraburkholderia graminis OAS925)
MGLDKRRRRNHRCAAHYSRMLSMHQAAGNQSSKSAEAGMSHIVIVGSGGHAKVVIDIVEQ
EGKHSIAGLIDAYRNVGERTLDYPVLGGEADLPRLVAEHDLQGTIIAIGDNVVRSKVAAK
VGALCPQLQFMNAIHPRATIGRGTTVGAGSVVMAGAVVNPDCRVGQFCILNTNSSLDHDS
VMDEFSSLAPGAITGGNCRIGAYSAISIGAVLRHGINVGEHSIVGAGATVLRDVEPYSVV
YGSPARKVRDRVAGARYL