Protein Info for ABIE51_RS17925 in Lysobacter sp. OAE881

Annotation: DUF3182 family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 389 PF11379: DUF3182" amino acids 27 to 378 (352 residues), 414.7 bits, see alignment E=1.5e-128

Best Hits

KEGG orthology group: None (inferred from 46% identity to mno:Mnod_2225)

Predicted SEED Role

"Biotin carboxylase (EC 6.3.4.14)" (EC 6.3.4.14)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 6.3.4.14

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (389 amino acids)

>ABIE51_RS17925 DUF3182 family protein (Lysobacter sp. OAE881)
MAAGGVWTQTAPDPGRAACADGAGCVVELLRRDRRSEHEAATGRWIGERVATLLDFEYGG
VHDAGVRYDAPPFFLPDVTLLATDAHELGIAGPQQLLGGVVPHAFVATKAITHPLVDGAR
TKPEGWSDELGRALDDVTLPGFAAFTVEDVGRAARSLFEQGLPARIKRADGIGGLGQSVA
TERKSLDAALAHLDPQSLARLGAVVELNLKPVTTYSVGTVALGSHRIAYFGMQTLTRNRS
GLSVYGGSSLACIRGDLNDLLATLDDEAERRVLRCAIRYDAEVSRAYPAFFASRRNYDVA
LGVDPSGMPRTGVLEQSWRVGGATPAEILALEAMHRDPLLSRVNVSTHEFHALVDPPPGA
QVSFRGEDPHVGPMTKYAMLDAQDDAHGR