Protein Info for ABIE51_RS15425 in Lysobacter sp. OAE881

Annotation: glutathione S-transferase N-terminal domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 211 signal peptide" amino acids 1 to 31 (31 residues), see Phobius details PF02798: GST_N" amino acids 11 to 81 (71 residues), 46 bits, see alignment E=1.6e-15 PF13417: GST_N_3" amino acids 13 to 87 (75 residues), 50 bits, see alignment E=8.8e-17 PF13409: GST_N_2" amino acids 19 to 82 (64 residues), 52.8 bits, see alignment E=1.5e-17 PF00043: GST_C" amino acids 103 to 193 (91 residues), 26.4 bits, see alignment E=2e-09 PF13410: GST_C_2" amino acids 123 to 176 (54 residues), 27.4 bits, see alignment E=9.1e-10

Best Hits

Swiss-Prot: 46% identical to SSPA_SHIFL: Stringent starvation protein A (sspA) from Shigella flexneri

KEGG orthology group: K03599, RNA polymerase-associated protein (inferred from 90% identity to sml:Smlt1607)

Predicted SEED Role

"Stringent starvation protein A"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (211 amino acids)

>ABIE51_RS15425 glutathione S-transferase N-terminal domain-containing protein (Lysobacter sp. OAE881)
MAASPRMRNALTLFSSTDCVLCHRVRLVLAAKGVTYDLVPVDPQNPPEDLVDLNPYHSVP
TLVERDLVLYAASVVSEYLDERYPHPPLMPVDPLSRARLRLAMLRLEHDWVPQVQAIQLG
NKAQAEAGRKRLKELLTASVPLFKASKFFLNPEMSLADCAMAPIIWRLDALGVPLPKDGK
AIEDYGNRIFRNPGFTRSLTDQERKLREMPA