Protein Info for ABIE51_RS15365 in Lysobacter sp. OAE881

Annotation: carboxypeptidase regulatory-like domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1137 signal peptide" amino acids 1 to 28 (28 residues), see Phobius details PF13620: CarboxypepD_reg" amino acids 34 to 115 (82 residues), 66.4 bits, see alignment 1.2e-22

Best Hits

Predicted SEED Role

"Oar protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1137 amino acids)

>ABIE51_RS15365 carboxypeptidase regulatory-like domain-containing protein (Lysobacter sp. OAE881)
MTHPNRVRLSKLTLGLLAALATAPVFAQATSAGVGGTVTRTDGQPVAGAEVVITHVESGT
VSRATTDASGRYVARGLRVGGPYTVTITKPGEGTKSEDNVYLDLNKTNTVNAALTGDLTT
LDTVTAVALGGSDVFSATKMGSGTSISRQTIEGLPSVNGNIQDYMRLDPRLAVTDRASGS
ISAGGQNPRFNKITIDGVSASDTFGLEGNNMPTQRQPVSMDAIEAIDVNVANYDVSFSGA
AGANVNAVTKSGTNEFHGTIYGSIRDGDWFGDYPARVAGSTLDVTGLPFDEFKKETTYGM
TFGGPLMKDKLFFFANYEKFKQTDIGPAGKSQGTNPLAVGADFSADDVARVQDIARNIWG
FEPGSTSGSGDTELEEYALKLDWNINDAHRANLRYSKLEQNRVRPEASTASVLALSSNWY
NHVKTVESYVGQLFSDWSDNFSTEFKVSYRDYSAIRVSPTTAPTVQVYFDDGSPTTAINT
GDAIRLGTERSSPGNTLLTETWNYFAAGTWTLGDHDIKFGGEYAENDIYNYFLQDSWGNY
SFYVPGTGTAKDFSFLENGRYFDYDLQTNPADPNAIAARYKDKKLGLFIQDTWYATPNLT
LTYGIRADRPEATPAPPFNACFASARVANGTGGAACPNGGFSLDNTATYSDDFILQPRFG
FNYTFNWERPAQLRGGVGLFQGDAPQVWVGNAYSSTGMNYTAYGNPGTYSPTASINCSGT
GPVNGWNPVTGCNNGLDFSADGFNQPIPAGGTGIRNVNAISEDFELPSVWKANLAMDVET
PWNGIVASAEILLTDVKNGLFYRTLNIGPGFIPANSPDGRVLYWNPNSVNKNATARFGNN
SYFGDVFLLENTNKGKGQQFTVSLTQPFMEGSDWSWSLAYTYTNAEEVSALTSSTAGSGF
GSQLSLNPNEPSSSTARYEIRDRITGSLNWDHKFFGDYSTSVGLFYEGRSGRPYSYIFSG
DANGDGRTFNDLFYVPAGPGDVQFGTLSATGVFTANAAMEQAFWNWMGTQTDLQAYRGQV
APENGFRANWVNTFDVRISQELPGFFKGHKSQIWFDIQNVGNLLNKDWGHVIDYGFNANL
AAATLVGIDPATGKYVYSYRSGTEFGQATAKGIPTNADGQTNGISQWSMSIGVRYEF