Protein Info for ABIE51_RS09595 in Lysobacter sp. OAE881

Annotation: CorA family divalent cation transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 327 transmembrane" amino acids 265 to 289 (25 residues), see Phobius details amino acids 299 to 323 (25 residues), see Phobius details PF01544: CorA" amino acids 35 to 315 (281 residues), 156.4 bits, see alignment E=5.5e-50

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (327 amino acids)

>ABIE51_RS09595 CorA family divalent cation transporter (Lysobacter sp. OAE881)
MQEPAGTLDIRRFESSGNVHTIELGEASLDDLTEDQLLWIDLEGGSEPTITDVLGRLGID
DEVAAWFLDRSAMPELRVRNGWFFVRVVAVRNDGELTYNGTVLAILAGRNFVITSHKEPV
GFLTKLRERESHDSGLGMLGADSFTASLLDWHVNSYFEAVADFESADERLETDILDDRHG
ECLHSLRGLRKAASRLRRMLSAHRGVFAAIARPDFRPDADGEVNRHFQTVDMHFQRAMEA
VENAREVVIGSFELFSNQTALRTNAIMRVLTILTALMGGLAVIAGVLGMNFEAPFFKTGL
IGFVVAVALMTGMALAGFAFAWWRKWL