Protein Info for ABIE51_RS09230 in Lysobacter sp. OAE881

Annotation: 50S ribosomal protein L9

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• TIGR00158: ribosomal protein bL9
  • amino acids 1 to 147 (147 residues), 157.8 bits, E=1.3e-50
• PF01281: Ribosomal_L9_N
  • amino acids 1 to 47 (47 residues), 75.8 bits, E=1.5e-25
• PF03948: Ribosomal_L9_C
  • amino acids 65 to 146 (82 residues), 89.7 bits, E=1.4e-29

Best Hits

Swiss-Prot: 70% identical to RL9_STRMK: 50S ribosomal protein L9 (rplI) from Stenotrophomonas maltophilia (strain K279a)

KEGG orthology group: K02939, large subunit ribosomal protein L9 (inferred from 70% identity to psu:Psesu_1676)

MetaCyc: 54% identical to 50S ribosomal subunit protein L9 (Escherichia coli K-12 substr. MG1655)

Predicted SEED Role

"LSU ribosomal protein L9p" in subsystem CBSS-262719.3.peg.410 or Ribosome LSU bacterial

Protein Sequence (150 amino acids)

>ABIE51_RS09230 50S ribosomal protein L9 (Lysobacter sp. OAE881)
MQLILLQNVQNLGKLGDKVNVKPGFGRNYLIPYGKAAPATAANLAEFEARRAEYEAKAKA
ALEGAEGRKAALEGVEVTITANASTEGKLYGSITPRDIADALTKHGHKVEKSEVVLGEGP
LRRTGEYEIVVHLHADIEATVKVIVVGEVA