Protein Info for ABIE51_RS08250 in Lysobacter sp. OAE881

Annotation: phosphoribosylanthranilate isomerase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 213 PF00697: PRAI" amino acids 10 to 203 (194 residues), 156 bits, see alignment E=5.2e-50

Best Hits

Swiss-Prot: 61% identical to TRPF_STRM5: N-(5'-phosphoribosyl)anthranilate isomerase (trpF) from Stenotrophomonas maltophilia (strain R551-3)

KEGG orthology group: K01817, phosphoribosylanthranilate isomerase [EC: 5.3.1.24] (inferred from 61% identity to smt:Smal_2850)

Predicted SEED Role

"Phosphoribosylanthranilate isomerase (EC 5.3.1.24)" in subsystem Auxin biosynthesis or Tryptophan synthesis (EC 5.3.1.24)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 5.3.1.24

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (213 amino acids)

>ABIE51_RS08250 phosphoribosylanthranilate isomerase (Lysobacter sp. OAE881)
MNASAHTRIKFCGMTRADDIALACELGVDAIGLVFAQRSSRRLDIEHARALRDVVADGID
VVALFMDNEAAYVQRVIDEVRPTLLQFHGSEDEAFSEAFGVPYLKAVAMGGDVASDALSR
HARAVALLLDSHAAGGAGGTGHRFDWSRIPHDSGRAFLLAGGLHPDNVFEAVNTVHPWGV
DVSSGIESAPGEKDAARMRRFVEEVRRADSLPR