Protein Info for ABIE51_RS04995 in Lysobacter sp. OAE881

Annotation: YbaL family putative K(+) efflux transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 561 transmembrane" amino acids 6 to 24 (19 residues), see Phobius details amino acids 32 to 49 (18 residues), see Phobius details amino acids 56 to 76 (21 residues), see Phobius details amino acids 86 to 109 (24 residues), see Phobius details amino acids 115 to 135 (21 residues), see Phobius details amino acids 148 to 171 (24 residues), see Phobius details amino acids 187 to 205 (19 residues), see Phobius details amino acids 226 to 256 (31 residues), see Phobius details amino acids 279 to 297 (19 residues), see Phobius details amino acids 304 to 326 (23 residues), see Phobius details amino acids 333 to 355 (23 residues), see Phobius details amino acids 367 to 386 (20 residues), see Phobius details PF00999: Na_H_Exchanger" amino acids 11 to 385 (375 residues), 248.8 bits, see alignment E=8.5e-78 TIGR00932: transporter, monovalent cation:proton antiporter-2 (CPA2) family" amino acids 15 to 293 (279 residues), 240.4 bits, see alignment E=1.4e-75 PF02254: TrkA_N" amino acids 420 to 531 (112 residues), 86.3 bits, see alignment E=1.9e-28

Best Hits

KEGG orthology group: K03455, monovalent cation:H+ antiporter-2, CPA2 family (inferred from 70% identity to xca:xccb100_1147)

Predicted SEED Role

"putative Glutathione-regulated potassium-efflux system protein KefB" in subsystem Potassium homeostasis

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (561 amino acids)

>ABIE51_RS04995 YbaL family putative K(+) efflux transporter (Lysobacter sp. OAE881)
MHHTSLIAILVAGFVLAFVFGAMAQKLRLSPLVGYLLAGVVAGPFTPGFVGDQTLAPQLA
EIGVILLMFGVGLHFSLRDLLDVKAIALPGALAQIALATALGWGMALLLGWSHGAGLVFG
LSLSVASTVVLLRALEERRLVETGRGRIAVGWLIVEDLAMVLALVLLPALAGLLKGGDTS
AVAVWEALFKTLAKVGGFVAVMLIVGRRVIPWILERVAGTGSRELFTLCVLAIALGVAFG
SAGLFGVSFALGAFFAGMVLNESEFSHQAANETLPLRDAFAVLFFVSVGMLFDPMILIER
PLQVLATFLIIVVGKSIAAYAIVRAFGKPRNTALLISTSLAQIGEFSFILAGLGLQLEVL
PKEGQDLILAGALLSIIVNPILFAWLDRREAREEALREDVVEEHMYPPIAPDLRDHVIQI
GYGRVGSELGRLLTERGVGLVVIDGEEDLVARARAAGIPAIRGNAANERVLREAAPERAN
TVMVAIPNALEAGEIIARLREINPALTIVARAHSDAEVKHLLQHGADGAVMAERELAHSL
AEMVMATPHYRGSRHLPPATA