Protein Info for ABIE51_RS04250 in Lysobacter sp. OAE881

Annotation: maleylacetoacetate isomerase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 221 PF02798: GST_N" amino acids 5 to 81 (77 residues), 52.3 bits, see alignment E=1.2e-17 PF13417: GST_N_3" amino acids 8 to 87 (80 residues), 58.1 bits, see alignment E=1.8e-19 TIGR01262: maleylacetoacetate isomerase" amino acids 8 to 218 (211 residues), 312.6 bits, see alignment E=6.1e-98 PF13409: GST_N_2" amino acids 14 to 82 (69 residues), 53.7 bits, see alignment E=4.9e-18 PF13410: GST_C_2" amino acids 134 to 185 (52 residues), 25.3 bits, see alignment E=2.6e-09

Best Hits

Swiss-Prot: 54% identical to MAAI_VIBCH: Probable maleylacetoacetate isomerase (maiA) from Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)

KEGG orthology group: K01800, maleylacetoacetate isomerase [EC: 5.2.1.2] (inferred from 70% identity to xal:XALc_2718)

MetaCyc: 50% identical to glutathion-dependent maleylpyruvate isomerase (Ralstonia sp. U2)
Maleylpyruvate isomerase. [EC: 5.2.1.4]

Predicted SEED Role

"Maleylacetoacetate isomerase (EC 5.2.1.2) @ Glutathione S-transferase, zeta (EC 2.5.1.18)" (EC 2.5.1.18, EC 5.2.1.2)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.5.1.18, 5.2.1.2

Use Curated BLAST to search for 2.5.1.18 or 5.2.1.2 or 5.2.1.4

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (221 amino acids)

>ABIE51_RS04250 maleylacetoacetate isomerase (Lysobacter sp. OAE881)
MAAEHLRLYSYWRSSAAYRVRIGLNLKSLPYETVPVHLIRDGGEQHSAAFKQVNPQELVP
VLQHGDRVMRQSVAILEYLDETWPEPPLLPAAARDRQRVRALAQTIACDIHPLNNLRVLQ
HFDRNWHVPQPERDAWVQHWVQEGFTALEAMLADHPSTGTFCEGNSPTLADCCLVPQVYN
ARRFAVDLSKYPTITRIEKACLALPAFDAARPEKQPDAPVA