Protein Info for ABIE51_RS02580 in Lysobacter sp. OAE881

Annotation: MFS transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 524 transmembrane" amino acids 57 to 78 (22 residues), see Phobius details amino acids 86 to 109 (24 residues), see Phobius details amino acids 111 to 111 (1 residues), see Phobius details amino acids 116 to 136 (21 residues), see Phobius details amino acids 144 to 166 (23 residues), see Phobius details amino acids 172 to 196 (25 residues), see Phobius details amino acids 208 to 226 (19 residues), see Phobius details amino acids 238 to 259 (22 residues), see Phobius details amino acids 279 to 302 (24 residues), see Phobius details amino acids 314 to 334 (21 residues), see Phobius details amino acids 341 to 364 (24 residues), see Phobius details amino acids 370 to 390 (21 residues), see Phobius details amino acids 491 to 511 (21 residues), see Phobius details PF07690: MFS_1" amino acids 26 to 416 (391 residues), 88.6 bits, see alignment E=2e-29

Best Hits

KEGG orthology group: None (inferred from 41% identity to rhi:NGR_b02410)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (524 amino acids)

>ABIE51_RS02580 MFS transporter (Lysobacter sp. OAE881)
MNASVAATSPSHPMPTIGRAVPTALAGAFFVNLANQFTATNLADIQGSLGASADEASWIA
TIYTMTSFVGIVLSPILVRTFGLRRYFASAAAVFSATAWMAFAATSLPMMIVARALQGVA
GGSFGPIAFVAVFALWKGPRATGGLALLAAALLVPANAGPIVSAFVEASFGWRALFLLQA
VLAAALLCTGLAWMPVAPVNRDALKTHWPAVTLLAIALASLVLVLSQGTRRFWLEDDVIA
IATSVSIGAWLGFAVLNRYATPRILDTKLLAGRDFGLPILLNLVFRASFAVTVYLIPLLL
AVTQGYRPEQTAQALWWCVLPQLAVFPLVWQLLARMDGRRVALGGLLLCAIGTLLAAFST
HLAAGEQLRAILMLVGVGQMMFLIPTLLSGASTLGPADGPTATVAFNATTLGGTTLGTGL
MSHFVTEREKFHSSVLVEQVSWLGSASSDRLSSLSGALDARWGEQDANVARAIAQVASVV
RREAWLLSIDDAFLVIGAVLLVSLCLVAFMRPAVIRPSLVGETP