Protein Info for ABIE51_RS02550 in Lysobacter sp. OAE881

Annotation: MASE1 domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 527 transmembrane" amino acids 12 to 32 (21 residues), see Phobius details amino acids 39 to 54 (16 residues), see Phobius details amino acids 61 to 79 (19 residues), see Phobius details amino acids 85 to 106 (22 residues), see Phobius details amino acids 118 to 140 (23 residues), see Phobius details amino acids 160 to 178 (19 residues), see Phobius details amino acids 190 to 210 (21 residues), see Phobius details amino acids 216 to 235 (20 residues), see Phobius details amino acids 242 to 262 (21 residues), see Phobius details amino acids 270 to 292 (23 residues), see Phobius details PF05231: MASE1" amino acids 20 to 295 (276 residues), 54.2 bits, see alignment E=1.9e-18 PF07730: HisKA_3" amino acids 323 to 386 (64 residues), 48.1 bits, see alignment E=2.1e-16 PF02518: HATPase_c" amino acids 424 to 511 (88 residues), 45.8 bits, see alignment E=1.2e-15

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (527 amino acids)

>ABIE51_RS02550 MASE1 domain-containing protein (Lysobacter sp. OAE881)
MNTRRATGHPLAVAGIVTVSVACSQWASMLLWMPNPRSHMVWFPGAVLLGALLLQPRRHW
WACLLGTAVGEAAAFGVLGVPPLAVTIAMLGSLVLTPAAAIALESLRSRLQSPLEDFRLL
TAFVVLGGLALPMLSAAWIAFSIRGTVLEPYLSDWPNVTLAQSLGNLMLVPAVVWTAMRR
RNAVPLDTSGTSIAVGAGLLVILCVLWTWHLPMQRLQPALVVAPVPFLIWAMVSFRAVGA
SLAMLAVGLLAMHFSVAGVGPFIRDDLATTTIAVQLWTVSLTVALLYMTVVVEQRATRTQ
ALQHAHQRLQSMTVQLMRAQEDERSRIARDLHDGINQSIASIAIRLSIARQHAQGAEREL
LGELQAAVTDVSEDVRRLSHELHPSLLRYTGLTMALRSLCEAQPAALRVHAELDELPELP
LDVSTALYRIAQESLRNVEKHARASEVTVRLQRVGADVQLEIGDDGIGLDDQTHDAPRGL
GLLSMRERAREIGGELRLVSDLHGGTRVIARVAGIASQANQRDDAWR