Protein Info for ABIE51_RS01850 in Lysobacter sp. OAE881

Annotation: sulfate ABC transporter permease subunit CysT

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 289 transmembrane" amino acids 21 to 45 (25 residues), see Phobius details amino acids 72 to 94 (23 residues), see Phobius details amino acids 106 to 129 (24 residues), see Phobius details amino acids 144 to 164 (21 residues), see Phobius details amino acids 197 to 218 (22 residues), see Phobius details amino acids 253 to 278 (26 residues), see Phobius details TIGR00969: sulfate ABC transporter, permease protein" amino acids 17 to 274 (258 residues), 307.6 bits, see alignment E=8.1e-96 TIGR02139: sulfate ABC transporter, permease protein CysT" amino acids 18 to 275 (258 residues), 386.1 bits, see alignment E=9.2e-120 PF00528: BPD_transp_1" amino acids 83 to 272 (190 residues), 72.2 bits, see alignment E=2.4e-24

Best Hits

Swiss-Prot: 51% identical to CYST_SALTY: Sulfate transport system permease protein CysT (cysU) from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)

KEGG orthology group: K02046, sulfate transport system permease protein (inferred from 64% identity to ote:Oter_2063)

MetaCyc: 51% identical to sulfate/thiosulfate ABC transporter inner membrane subunit CysU (Escherichia coli K-12 substr. MG1655)
ABC-19-RXN [EC: 7.3.2.5]; ABC-7-RXN [EC: 7.3.2.5, 7.3.2.3]; 7.3.2.3 [EC: 7.3.2.5, 7.3.2.3]; TRANS-RXN0-478 [EC: 7.3.2.5, 7.3.2.3]; TRANS-RXN0-479 [EC: 7.3.2.5, 7.3.2.3]

Predicted SEED Role

"Sulfate transport system permease protein CysT" in subsystem Cysteine Biosynthesis

MetaCyc Pathways

Isozymes

No predicted isozymes

Use Curated BLAST to search for 7.3.2.3 or 7.3.2.5

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (289 amino acids)

>ABIE51_RS01850 sulfate ABC transporter permease subunit CysT (Lysobacter sp. OAE881)
MSTLALPALITRRGRRPLPGFGLSLGLGLAWLSVVVLLPLAALALRAAGLGAEGWLRAIQ
DPRVQASLKLSFTASFVAALIASVAGALVAWVVVRYRFPGRRLLDALVDLPFALPTAVAG
IALTAIYSANGWVGRYTEPLGIKIAYTPIGITIALIFIGLPFAVRTVQPVLEALGREQEE
AAASLGASRLTTLRRVVLPELLPALLTGFSLAFARALGEYGSVIFIAGNLPYKTEIAPLL
ITIRLEEYDYGGAVAIAALLLAASFVCLLAINAIPLLFAHERKGARRDV