Protein Info for ABIE51_RS01620 in Lysobacter sp. OAE881

Annotation: glucose-6-phosphate dehydrogenase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 482 TIGR00871: glucose-6-phosphate dehydrogenase" amino acids 4 to 479 (476 residues), 583.2 bits, see alignment E=2.1e-179 PF00479: G6PD_N" amino acids 7 to 181 (175 residues), 187.7 bits, see alignment E=3.3e-59 PF02781: G6PD_C" amino acids 184 to 478 (295 residues), 411.8 bits, see alignment E=1.4e-127

Best Hits

Swiss-Prot: 62% identical to G6PD_RHIME: Glucose-6-phosphate 1-dehydrogenase (zwf) from Rhizobium meliloti (strain 1021)

KEGG orthology group: K00036, glucose-6-phosphate 1-dehydrogenase [EC: 1.1.1.49] (inferred from 64% identity to bid:Bind_2867)

Predicted SEED Role

"Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)" in subsystem Entner-Doudoroff Pathway or Pentose phosphate pathway (EC 1.1.1.49)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 1.1.1.49

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (482 amino acids)

>ABIE51_RS01620 glucose-6-phosphate dehydrogenase (Lysobacter sp. OAE881)
MAPFDLIIFGGTGDLALRKLLPALFHRYVDGQIVAGTRIFGLARDSQTDEAYRERVREAL
QKHLAFDMRAPSMLEPFLQLLSYRRIDLQAEDGWGELAAELADESRVRVFYLAVGPDLFG
SVGAKLQAHGLTGANTRVVVEKPIGHDRASAAAINDALGQVFAESQIYRIDHYLGKETVQ
NLTALRFGNALFEPLWRAEHIDHVQITVAETVGLERRASYYDKSGALRDMVQNHMLQLLC
LVAMEPPSSLAADAIRDEKLKVLHSLKPIADGATSHLTVRGQYRAGAVEGRPVPGYLEEL
GTNTSRTETFVALKAEVSNWRWAGVPFYLRTGKRLADRMSEIVLTFRKVPHSIFGDEPVA
QNQLVIRLQPDEGVKLWIVNKIPGPGGLRLRRVPMDLSFAETFGGRQPEAYERLLMDVVR
GNPMLFMRRDEVEAAWSWIDPILAAWQSSNESPKAYTAGSWGPSAAVALIERDGRTWHED
AV