Protein Info for ABIE51_RS01295 in Lysobacter sp. OAE881

Annotation: SprT family zinc-dependent metalloprotease

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 267 PF01863: YgjP-like" amino acids 45 to 250 (206 residues), 149 bits, see alignment E=9.9e-48

Best Hits

KEGG orthology group: K07043, (no description) (inferred from 61% identity to xac:XAC4222)

Predicted SEED Role

"Putative predicted metal-dependent hydrolase" in subsystem Restriction-Modification System

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (267 amino acids)

>ABIE51_RS01295 SprT family zinc-dependent metalloprotease (Lysobacter sp. OAE881)
MPSPPRPLARLFAPTPRTVERETLDIELSDGRTVPLQRVRDPRARRMKLSVDERGARLTI
PMRASLATADRFVTQHRDWLAAQLERFAIDGVPSLEPGVDVQLPLRGALHDVRWQAGRFT
RLDHANDGTGDLVFTHPARAGDTAVRRAVRDFLEAQGRADVGRWMPRYLPALPRAPRRVT
FKIMSSQWGSLAPDGSMALDLSLVLARPGAFEYVLVHELCHLIHADHSRSFWREVEARCP
QWREERDYFHAEGRRLKATLRALCGKV