Protein Info for ABCV34_RS15245 in Castellaniella sp019104865 MT123

Annotation: gephyrin-like molybdotransferase Glp

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 402 transmembrane" amino acids 300 to 310 (11 residues), see Phobius details PF03453: MoeA_N" amino acids 3 to 162 (160 residues), 158.3 bits, see alignment E=2e-50 TIGR00177: molybdenum cofactor synthesis domain" amino acids 172 to 309 (138 residues), 92.8 bits, see alignment E=1e-30 PF00994: MoCF_biosynth" amino acids 175 to 312 (138 residues), 108.1 bits, see alignment E=4.8e-35 PF03454: MoeA_C" amino acids 327 to 395 (69 residues), 52.7 bits, see alignment E=6.3e-18

Best Hits

KEGG orthology group: K03750, molybdopterin biosynthesis protein MoeA (inferred from 56% identity to put:PT7_2095)

Predicted SEED Role

"Molybdopterin biosynthesis protein MoeA" in subsystem Molybdenum cofactor biosynthesis

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (402 amino acids)

>ABCV34_RS15245 gephyrin-like molybdotransferase Glp (Castellaniella sp019104865 MT123)
MLDFDAAQARLAARAQAPAEHETVTLDALLGRVLAHDLVANLDLPPADNSAMDGYALRAA
DAAVAGATLPVQQRCFAGQTPDPLRPGQAIRLFTGSLIPAGADTVVMQENCQEGDAGVTF
ASAVQPGRHIRRQGEDMRHGHVIVRRGTRLRPGHIAVLAAQGYAQAPVFRHLRVGILTTG
DELVAPGQTLPAAAIYNSNAPMLASLCQGLHTAPAVLRHARDDAQAIEQAITELSGTCDL
VLSVGGASVGEKDLVKPAIESLGGTLDLWRVRMKPGKPVALADLNDRPIVCLPGNPVSAF
VVFALLVSPLIRGLQGCGQVLPPVRRGILRTDRPLGGDRDDFVRIQAAAQDDGLPVLTPH
VQQSSGALSSLAWADGLARIPAGTTLQSGAEVGWYGLADWLG