Protein Info for ABCV34_RS15010 in Castellaniella sp019104865 MT123
Annotation: protein-methionine-sulfoxide reductase catalytic subunit MsrP
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 58% identical to MSRP_RALSO: Protein-methionine-sulfoxide reductase catalytic subunit MsrP (msrP) from Ralstonia solanacearum (strain GMI1000)
KEGG orthology group: K07147, (no description) (inferred from 62% identity to bpt:Bpet1745)MetaCyc: 58% identical to protein-L-methionine sulfoxide reductase catalytic subunit MsrP (Escherichia coli K-12 substr. MG1655)
1.8.5.M7 [EC: 1.8.5.M7]; 1.8.5.M7 [EC: 1.8.5.M7]
Predicted SEED Role
"Putative sulfite oxidase subunit YedY"
Isozymes
No predicted isozymesUse Curated BLAST to search for 1.8.5.M7
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (320 amino acids)
>ABCV34_RS15010 protein-methionine-sulfoxide reductase catalytic subunit MsrP (Castellaniella sp019104865 MT123) MHVEQSRDIPPSGITPESVWLGRRRWLRQMAAGSLALGMGGLARASAGDGPTGPVLPAPP NARWSTTEKPNSWHDITTYNNFYEFGTGKGDPAEYAGRMRLRPWAVKIDGAVGKPMTLDL DDLRKLAPLEERVYRLRCVEAWSLVVPWIGYSLSHLLQRVEPTADARYVVFTSAVQPDVM PGVRQRILDWPYVEGLRMDEAMHPLTLLTFGLYGHDLPPQDGAPLRIIVPWKYGFKSAKS LVHIRLQAEQPVSSWMRAAPDEYGFYANVNPSVPHPRWSQATERRIGTGFFASRIPTLPF NGYAESVAGLYQGMDLRRNF