Protein Info for ABCV34_RS13065 in Castellaniella sp019104865 MT123

Annotation: sugar transferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 867 signal peptide" amino acids 1 to 25 (25 residues), see Phobius details transmembrane" amino acids 34 to 53 (20 residues), see Phobius details amino acids 63 to 82 (20 residues), see Phobius details amino acids 88 to 108 (21 residues), see Phobius details amino acids 120 to 143 (24 residues), see Phobius details amino acids 156 to 175 (20 residues), see Phobius details amino acids 184 to 200 (17 residues), see Phobius details amino acids 206 to 223 (18 residues), see Phobius details amino acids 235 to 257 (23 residues), see Phobius details amino acids 343 to 368 (26 residues), see Phobius details amino acids 384 to 405 (22 residues), see Phobius details amino acids 411 to 427 (17 residues), see Phobius details amino acids 457 to 482 (26 residues), see Phobius details amino acids 493 to 512 (20 residues), see Phobius details amino acids 523 to 544 (22 residues), see Phobius details amino acids 551 to 571 (21 residues), see Phobius details amino acids 684 to 705 (22 residues), see Phobius details amino acids 845 to 864 (20 residues), see Phobius details TIGR03025: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase" amino acids 611 to 866 (256 residues), 324.1 bits, see alignment E=9.4e-101 PF02397: Bac_transf" amino acids 679 to 861 (183 residues), 222.9 bits, see alignment E=1.1e-70

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (867 amino acids)

>ABCV34_RS13065 sugar transferase (Castellaniella sp019104865 MT123)
MVHRGFSISALLTLGLLLAALGSLRDVVTPWGYWGLWALWGLAAVALTWPVHVAGTKRPM
PPASVWGSFAALVLGMAVSAWANHSAITLHHGIKIAIIGLCCAIAWRLAADLGWGDRAAI
LRWVVAAVVLVFLASKAAPSGYYIAMGAAEREGSFLAWPGVIWKAGAFFAPLFLADMLVC
PRRWIANGVAVAGCVFLVVIDGTRTGVLVLGLTALAFGLLLAWRHDWRALSGARPAMAVC
VPALFGLLLLSTGIGYLSHGSAGSPPIQRAGVSGMFGGKTEALMETAIEPVTTTRLGEGD
PQRIRLLEYGMDRAMDCLPLGCGFGSTAMDPGYGVVMPVHNAYLGVLADFGVLGLAGMLG
FIVAAILPIRRVLRGGAGSAKDTYFVVASSGAALAYLASLMLHTFSSEMSEWGYLIVMLA
FAWLPVMQGRRAACPGADGQPDALGCYERRHSRWYEYVLLGGPFQVVAGLLVVAVLPAIL
AWGWPFWQHMDVVRVNTLLAISLSFLFIILTLRRLGQFSGGAIIAHIAPVVTGTFLVAFA
ALFFSRSGYSRPILLMAYAAALAWCYAAYFVGRKYRQLKLAVVPLGEAQAIRPQRNLEIR
QLAVPDLAGIRYDAVVADLDADDLSPDWERFLAQCILSRVPVFHVRQMRERLTGRVEIEN
LSENDVGSLLPSPLYSVCKRLIDMAGALAIIPVAVPLMLLTALAIRLDSPGPALFVQSRV
GLGGRDFRIYKFRSMVADAESNGARLASDGDDRITRVGAFIRKTRLDELPQLWNVLKGDM
SLIGPRPEQRVFVDQFDAEIPFYIYRHVVRPGITGWAQVMQGYTADADETRVKIQHDFYY
IKHFSLWLDILIVFKTVRIVLTGWGAR