Protein Info for ABCV34_RS12620 in Castellaniella sp019104865 MT123

Annotation: glutathione S-transferase N-terminal domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 202 PF02798: GST_N" amino acids 3 to 72 (70 residues), 60.5 bits, see alignment E=4.9e-20 PF00462: Glutaredoxin" amino acids 3 to 35 (33 residues), 23.4 bits, see alignment 1.7e-08 PF13417: GST_N_3" amino acids 4 to 77 (74 residues), 60.7 bits, see alignment E=4.1e-20 PF13409: GST_N_2" amino acids 9 to 73 (65 residues), 65 bits, see alignment E=2.2e-21 PF00043: GST_C" amino acids 102 to 187 (86 residues), 32.6 bits, see alignment E=2.3e-11 PF13410: GST_C_2" amino acids 119 to 169 (51 residues), 28.8 bits, see alignment E=3.3e-10

Best Hits

KEGG orthology group: K03599, RNA polymerase-associated protein (inferred from 93% identity to put:PT7_3104)

Predicted SEED Role

"Stringent starvation protein A"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (202 amino acids)

>ABCV34_RS12620 glutathione S-transferase N-terminal domain-containing protein (Castellaniella sp019104865 MT123)
MMVLYSGTTCPFSQRCRFVLFEKGMDFEIRDIDLYNKPEDIAVMNPYGQVPILVERDLIL
YESNIINEYIDERFPHPQLMPADPIMRARTRLFLYNFEKELFVHVSTLENRSIRDEKIRD
TARANIRDRLAQLAPLLVKNKFMLGEEFSMLDVAVAPLLWRLAHYGIELPKSAAPIQKYA
ERLFSRPAYIEALTPSEKVMRR