Protein Info for ABCV34_RS10620 in Castellaniella sp019104865 MT123

Annotation: dienelactone hydrolase family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 219 PF02230: Abhydrolase_2" amino acids 13 to 215 (203 residues), 184.7 bits, see alignment E=4.4e-58 PF03959: FSH1" amino acids 17 to 176 (160 residues), 27 bits, see alignment E=6.8e-10 PF01738: DLH" amino acids 100 to 201 (102 residues), 23.1 bits, see alignment E=9.8e-09

Best Hits

Swiss-Prot: 43% identical to APTH1_NEUCR: Acyl-protein thioesterase 1 (B2J23.070) from Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)

KEGG orthology group: K06999, (no description) (inferred from 62% identity to bpt:Bpet0590)

Predicted SEED Role

"phospholipase/carboxylesterase family protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (219 amino acids)

>ABCV34_RS10620 dienelactone hydrolase family protein (Castellaniella sp019104865 MT123)
MLETIERTTGPNPTHSVIWLHGLGADGHDFEPVVPELAHPDLPDIRFVFPHAPVRPVTLN
QGMSMRAWFDLYGLDRDAHEDIDGIRTTRHAVTDLIAREAERGIPQERIVLAGFSQGCAM
ALYTGLRLEHRLAGLIGLSGYLPLRNTLAAELHPANAATPIFMAHGTDDMVVPLAFAETS
RDAMTRLGCAVEWHTYPMPHGLHPQELDDIRMFLVRVLG