Protein Info for ABCV34_RS09140 in Castellaniella sp019104865 MT123

Annotation: magnesium-translocating P-type ATPase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 921 transmembrane" amino acids 102 to 121 (20 residues), see Phobius details amino acids 127 to 144 (18 residues), see Phobius details amino acids 312 to 332 (21 residues), see Phobius details amino acids 341 to 365 (25 residues), see Phobius details amino acids 724 to 745 (22 residues), see Phobius details amino acids 751 to 770 (20 residues), see Phobius details amino acids 791 to 814 (24 residues), see Phobius details amino acids 826 to 844 (19 residues), see Phobius details amino acids 856 to 877 (22 residues), see Phobius details amino acids 890 to 909 (20 residues), see Phobius details TIGR01524: magnesium-translocating P-type ATPase" amino acids 46 to 921 (876 residues), 1290.3 bits, see alignment E=0 PF00690: Cation_ATPase_N" amino acids 56 to 119 (64 residues), 50.7 bits, see alignment 3.5e-17 PF00122: E1-E2_ATPase" amino acids 192 to 374 (183 residues), 143.9 bits, see alignment E=1.2e-45 TIGR01494: HAD ATPase, P-type, family IC" amino acids 194 to 430 (237 residues), 105.1 bits, see alignment E=3.1e-34 amino acids 634 to 751 (118 residues), 103.4 bits, see alignment E=1e-33 PF00702: Hydrolase" amino acids 390 to 676 (287 residues), 53.5 bits, see alignment E=1.3e-17 PF13246: Cation_ATPase" amino acids 456 to 503 (48 residues), 35.6 bits, see alignment 2.3e-12 PF00689: Cation_ATPase_C" amino acids 745 to 911 (167 residues), 73.4 bits, see alignment E=6e-24

Best Hits

KEGG orthology group: K01531, Mg2+-importing ATPase [EC: 3.6.3.2] (inferred from 70% identity to lhk:LHK_01296)

Predicted SEED Role

"Mg(2+) transport ATPase, P-type (EC 3.6.3.2)" (EC 3.6.3.2)

Isozymes

Compare fitness of predicted isozymes for: 3.6.3.2

Use Curated BLAST to search for 3.6.3.2

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (921 amino acids)

>ABCV34_RS09140 magnesium-translocating P-type ATPase (Castellaniella sp019104865 MT123)
MRLIILKDLFVGFLRARHMTRHFRRRFLPDVGVLPEVSHEVPHALGQELRAAALSEPEAV
LARLDSRIDGLAESRAEEIRGAVGFNEVEQEKPLPWWKHLWHCFRTPFNLLLTLLAVVSG
ITGDYEALVVIGTMVVLSTLLRFWQEARSNREADAIKSLVTNTATVVRPVAPVDAGAPAD
EVFGVRLDDGLGHQSEVEVRLLVPGDVVLLAAGDMIPADCRVLSAKDLFVAQAAMTGESL
PVEKFALQRDESVQNPLELENILFMGTNVVSGSARAVVVNTGERTYFGALAGRVLAQDRA
PTSFQVGVNRISWLLIRFMLVMAPVVLLINGFTKGDWGEALLFAVSVAVGLTPEMLPMIA
TSTLAKGAVTLARRKVVVKQLDAIQNFGAMDVLCTDKTGTLTQDKIFLERHVDAWGEESE
EVLELAWLNSRHQTGLKNLLDVAVLERGGVDGPSDVAGRFRKVDEMPFDFVRRRMSVVVS
GPDGNHRVITKGAVEEVLQVCDRVMHDGVEVPLTPELLERIRAVTTGLNEEGLRVVAVAS
RTLAPVRQTYGVADERALVLAGTIAFLDPPKESTREALAALAAHGVAVKVLTGDNERITA
KVCREVGLVPRNVLLGGDVEVMDDVALGRAVETTDVFARLTPTHKARIVRLLKANGHVVG
FLGDGINDAAALRTADIGISVDSAVDIAREAADIILLEKSLMVLEAGVVEGRRTFVNMLK
YIKMTASSNFGNVFSVLVASAFIPFLPMLPIHLLVLNLLYDISQIAIPFDDVDDDQLQRP
QRWEPGEVGRFMLFFGPISSIFDILTFFMMWFVFAANSAAHQTLFQSGWFVVSLLTQMLV
VHMIRTAKVPFIQSRASWPLLFMTVTIIAVGVFLPLGPLAPALSLESLPPLYFVLLPLIV
LGYMALTQWMKGIYCRRWGWQ