Protein Info for ABCV34_RS08455 in Castellaniella sp019104865 MT123

Annotation: polyhydroxyalkanoate depolymerase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• TIGR01849: polyhydroxyalkanoate depolymerase, intracellular
  • amino acids 2 to 403 (402 residues), 597.2 bits, E=6.7e-184
• PF06850: PHB_depo_C
  • amino acids 203 to 404 (202 residues), 311.5 bits, E=1.1e-97

Best Hits

KEGG orthology group: K05973, poly(3-hydroxybutyrate) depolymerase [EC: 3.1.1.75] (inferred from 77% identity to bpt:Bpet1727)

Predicted SEED Role

"Intracellular PHB depolymerase (EC 3.1.1.-)" in subsystem Polyhydroxybutyrate metabolism (EC 3.1.1.-)

KEGG Metabolic Maps

• 2,4-Dichlorobenzoate degradation
• Alkaloid biosynthesis II
• Ascorbate and aldarate metabolism
• Butanoate metabolism
• Glycerophospholipid metabolism
• Retinol metabolism

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.1.1.- or 3.1.1.75

Protein Sequence (405 amino acids)

>ABCV34_RS08455 polyhydroxyalkanoate depolymerase (Castellaniella sp019104865 MT123)
MLYDLHELQRSLLAPFTAFTETGSQLFSNPYSPLAYTPLSRQFAAAYELAHRVGKDYQKP
AWNLPFTTIDGRETAVHEDIALAQPFCHLVHFRRETTRQDPRVLLVAPLSGHHATLLRDT
VRALLPSHDVYVTDWIDARMVPIADGTFGLDDYVHYIQAFLVHLGPDTHVISVCQPTVPV
LAAVSLLASTDAPCQPRTMIMMGGPIDTRRSPTQVNRLATTKPYAWFEDNLIHRVPPRYV
GAGRLVYPGFLQHAGFVAMNPDRHVKSHYDFYLDLLRGDDSDAQAHRRFYDEYNAVLDMP
AQFYLDTIRTVFQEFRLPRGTWTIDGQLVEPTAIRKTALLTIEGELDDISGEGQTHAAHD
LCASLPDGMREAHTAAGCGHYGIFSGRRWRAQICPKISSFIRAHA