Protein Info for ABCV34_RS03160 in Castellaniella sp019104865 MT123

Annotation: prolipoprotein diacylglyceryl transferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 265 transmembrane" amino acids 18 to 36 (19 residues), see Phobius details amino acids 56 to 76 (21 residues), see Phobius details amino acids 95 to 113 (19 residues), see Phobius details amino acids 175 to 193 (19 residues), see Phobius details amino acids 199 to 217 (19 residues), see Phobius details amino acids 229 to 255 (27 residues), see Phobius details TIGR00544: prolipoprotein diacylglyceryl transferase" amino acids 3 to 260 (258 residues), 282.3 bits, see alignment E=2.1e-88 PF01790: LGT" amino acids 9 to 254 (246 residues), 282.6 bits, see alignment E=1.2e-88

Best Hits

Swiss-Prot: 71% identical to LGT_BORA1: Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase (lgt) from Bordetella avium (strain 197N)

KEGG orthology group: K13292, phosphatidylglycerol:prolipoprotein diacylglycerol transferase [EC: 2.-.-.-] (inferred from 76% identity to put:PT7_3688)

Predicted SEED Role

"Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)" (EC 2.4.99.-)

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.-.-.-, 2.4.99.-

Use Curated BLAST to search for 2.-.-.- or 2.4.99.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (265 amino acids)

>ABCV34_RS03160 prolipoprotein diacylglyceryl transferase (Castellaniella sp019104865 MT123)
MLQYPQIDPIALQIGPLAIHWYGLMYLTGFALAWLLGRWRIRHHPCGLTLRDLEDIIFYS
VLGVVIGGRLGYVLFYKPGEYLSHPLSALYLWEGGMSFHGGLLGVIVAMLIFARKRGRTL
LEIGDFVAPLIPLGLAAGRLGNFINGELWGRATTVPWGMVFPQTGDGIARHPSQLYEMGL
EGFALFALIWWFARKPRPIGQTSAVFLMGYGVFRFMVEFTREPDNYLGLFAGGLSMGQLL
SLPMILFGIFIYWWAARRSAQALTP