Protein Info for ABCV34_RS02350 in Castellaniella sp019104865 MT123

Annotation: sulfite exporter TauE/SafE family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 261 transmembrane" amino acids 7 to 35 (29 residues), see Phobius details amino acids 47 to 65 (19 residues), see Phobius details amino acids 77 to 97 (21 residues), see Phobius details amino acids 103 to 122 (20 residues), see Phobius details amino acids 145 to 172 (28 residues), see Phobius details amino acids 184 to 205 (22 residues), see Phobius details amino acids 212 to 232 (21 residues), see Phobius details amino acids 239 to 257 (19 residues), see Phobius details PF01925: TauE" amino acids 12 to 252 (241 residues), 152.7 bits, see alignment E=6.8e-49

Best Hits

KEGG orthology group: K07090, (no description) (inferred from 65% identity to put:PT7_0483)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (261 amino acids)

>ABCV34_RS02350 sulfite exporter TauE/SafE family protein (Castellaniella sp019104865 MT123)
MVDSLWLIPACLAVGGIIGFSGGVLGIGGGLFAIPLLGLVLGYEQQAAQGTALIMVLPAV
LLTVRKYHQRAPIDLRSAAAGAAGSIVFTWIGAQIALGIDPWLLRRIYAGFVFLIALFYF
RESLGRKARSRPASHFREVGQVRRLWYFLVGIFAGLTGGIFGVGGSVLAVPFMTTLFRLR
QTSAQALALTMIVPGTFVALATYAWHGQAHGLVGIPLALGSLLCVPYGVRLAYSLPEARL
KLIFACMLLLIMGLLLARGAS