Protein Info for ABCV34_RS00350 in Castellaniella sp019104865 MT123

Annotation: serine O-acetyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 319 TIGR01172: serine O-acetyltransferase" amino acids 6 to 167 (162 residues), 234.4 bits, see alignment E=3.2e-74 PF00132: Hexapep" amino acids 118 to 152 (35 residues), 30.2 bits, see alignment 1.3e-11

Best Hits

Predicted SEED Role

"Serine acetyltransferase (EC 2.3.1.30)" in subsystem Conserved gene cluster possibly involved in RNA metabolism or Cysteine Biosynthesis or Methionine Biosynthesis (EC 2.3.1.30)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.3.1.30

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (319 amino acids)

>ABCV34_RS00350 serine O-acetyltransferase (Castellaniella sp019104865 MT123)
MFDQLREDIACIHERDPAARSRIEILTCYPGLHAILIHRMAHRLWIRHWYWAGRFVSHLG
RLLTGIEIHPGARIGNRVFIDHGFGVVIGETAEIGDDCTIYQGVTLGGTRLYKGEKRHPT
LEEGVVVGAGAQILGGFTVGAHARIGSNAVVIKPVPAGATAVGNPARIILPQDHEAAPDP
ANVPDHTEAQPAPFPSATTPDGVTARPGDTASATAQGLPCQSEWAARPLQDLLQRGRADE
GRARTGGAAEDRPEDFAPYGVGRSDDDPLVQVLHELINHSAQQDQRIHKLCQAMEDLGQR
IENGQRPLDADRLNRMVDE