Protein Info for DvMF_2812 in Desulfovibrio vulgaris Miyazaki F

Annotation: protein of unknown function DUF81 (RefSeq)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 317 transmembrane" amino acids 15 to 38 (24 residues), see Phobius details amino acids 78 to 100 (23 residues), see Phobius details amino acids 110 to 126 (17 residues), see Phobius details amino acids 193 to 222 (30 residues), see Phobius details amino acids 229 to 255 (27 residues), see Phobius details amino acids 266 to 283 (18 residues), see Phobius details amino acids 295 to 313 (19 residues), see Phobius details PF01925: TauE" amino acids 17 to 310 (294 residues), 142 bits, see alignment E=1.2e-45

Best Hits

KEGG orthology group: K07090, (no description) (inferred from 100% identity to dvm:DvMF_2812)

Predicted SEED Role

"membrane protein, putative"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See B8DRB3 at UniProt or InterPro

Protein Sequence (317 amino acids)

>DvMF_2812 protein of unknown function DUF81 (RefSeq) (Desulfovibrio vulgaris Miyazaki F)
MYFPVAGIHAEPWIPPLVAFVVSFFMSMGGVSGAFLLLPFQMSFLGYVNPSVSATNQFYN
VVAIPSGVYRYIREGRMVWPLTWVVIIGTLPGVLIGAFVRVTYLPNARDFKLFAACVLAY
IALRMVRDLTKKKAGNGKATAEEKFRALVRTHREKAAAEGKNPDDLPAVCMNECCLSRIS
YSFYGETYSFRTVGIFTLSFIVGIVGGVYGIGGGAIIAPFFVSFFGLPVYTVAGAALMGT
FVTSVAGVTFYMAIAPLYPHMSVAPDWTLGLLLGIGGMAGMYLGARCQKHVPANLIKWML
CCILLFTAGKYVVEFFR