Protein Info for DvMF_2303 in Desulfovibrio vulgaris Miyazaki F

Annotation: esterase/lipase-like protein (RefSeq)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 336 signal peptide" amino acids 1 to 32 (32 residues), see Phobius details PF20434: BD-FAE" amino acids 101 to 207 (107 residues), 96.2 bits, see alignment E=3.2e-31 PF00135: COesterase" amino acids 101 to 237 (137 residues), 45.1 bits, see alignment E=1.1e-15 PF07859: Abhydrolase_3" amino acids 115 to 207 (93 residues), 48.8 bits, see alignment E=1.2e-16

Best Hits

KEGG orthology group: None (inferred from 100% identity to dvm:DvMF_2303)

Predicted SEED Role

"putative para-nitrobenzyl esterase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See B8DQX5 at UniProt or InterPro

Protein Sequence (336 amino acids)

>DvMF_2303 esterase/lipase-like protein (RefSeq) (Desulfovibrio vulgaris Miyazaki F)
MPARRTASSFLPLLLTALLAAALACPTPEAAAGPIFDRLRERRAERAASGSTASGNGAAN
RQDDAAARRGSTPQHPLDPASIVPGSRRLVESYGPHPAQVMDVYLPPHPQHAPVIVMVHG
GAWKVGDKANPGLMDNKLARWLPKGYVLASINYRMLPDAMALEQAGDVAAAVRRVADAAP
GWGADPSRIILMGHSAGAHLVALVSSAPSLLDRPVAGAVVLDSAAMDVPAIMQRRHLGFY
DEAFGKNPSYWIKASPQQQWTTGAVPMLLVCSTKRADRPCAAAEALAAKTARAGRKTPVL
PQALTHGEINHLLGLPGAYTDAVDGFISARLEEAAR