Protein Info for DvMF_1870 in Desulfovibrio vulgaris Miyazaki F

Annotation: protein of unknown function DUF362 (RefSeq)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 301 PF04015: DUF362" amino acids 34 to 227 (194 residues), 164.9 bits, see alignment E=1.3e-52

Best Hits

KEGG orthology group: None (inferred from 100% identity to dvm:DvMF_1870)

Predicted SEED Role

"iron-sulfur cluster-binding protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See B8DMH0 at UniProt or InterPro

Protein Sequence (301 amino acids)

>DvMF_1870 protein of unknown function DUF362 (RefSeq) (Desulfovibrio vulgaris Miyazaki F)
MALLRCPDYDPQRVGRVVAEALDASGWTPPRGHVLVKPNLLRATPALSCTHPQVVRAACA
WLLDSGCRITVADSPGFGTARGVAEAIGLTEALRPLGLSVVPLDDAVQVPLSFGGSIGVA
RCALQADGVLSVPRLKAHSQMRVTLAVKNLFGGVPGVRKAFVHTRHGDRDHRFEGALVEV
AATLPPTAALLDGVQAMHVTGPGAGKPYHLGLVGASASGVALDAAVCGLLGLTPAQVPLW
AELARRAAPGAHSGEIELVREGPGAFDAGRFEVPGVLKPMSFRPGTLLRSTVRRLWAAWR
S