Protein Info for DvMF_1864 in Desulfovibrio vulgaris Miyazaki F

Annotation: phosphate acetyltransferase (RefSeq)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 704 PF13500: AAA_26" amino acids 4 to 186 (183 residues), 90.9 bits, see alignment E=1.6e-29 PF07085: DRTGG" amino acids 219 to 332 (114 residues), 97.6 bits, see alignment E=5.4e-32 PF01515: PTA_PTB" amino acids 378 to 694 (317 residues), 448 bits, see alignment E=3.3e-138 TIGR00651: phosphate acetyltransferase" amino acids 393 to 694 (302 residues), 428.6 bits, see alignment E=7.7e-133

Best Hits

Swiss-Prot: 87% identical to PTA_DESVH: Phosphate acetyltransferase (pta) from Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / DSM 644 / NCIMB 8303)

KEGG orthology group: K13788, phosphate acetyltransferase [EC: 2.3.1.8] (inferred from 100% identity to dvm:DvMF_1864)

Predicted SEED Role

"Phosphate acetyltransferase (EC 2.3.1.8)" in subsystem Ethanolamine utilization or Fermentations: Lactate or Fermentations: Mixed acid or MLST or Propanediol utilization or Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate or Threonine anaerobic catabolism gene cluster (EC 2.3.1.8)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.3.1.8

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See B8DMG4 at UniProt or InterPro

Protein Sequence (704 amino acids)

>DvMF_1864 phosphate acetyltransferase (RefSeq) (Desulfovibrio vulgaris Miyazaki F)
MANNLYITATESKSGKSAVVLGMMQLLLRDIRKVAFFRPIINRPVTDAVDHDTNLILTHF
NLDIPVADTYAYSLQDARELINNGQHATLLENILKKYKQLEDSYDFVLCEGTDFLGKDAA
FEFDLNADIAANLGCPVMVVANGQQKTAHEIVASTQLTIDLLDEKGLDIVAAVINRASVT
DAERDVVISSLECKVNCSNPLAVYVVPEEPTLGKPTMGDVKKWLNAQVLYGHGRMDTLVD
DYVIAAMQIGNFLDYVTPGCLVITPGDRSDIILTGLATRLSGAYPDISGMLLTGGIQPAP
NVHRLIEGWTGVPIPILSVKDHTYKTIQTLNELYGKIEPDNERKINTALGLFERSVDSQE
LGRRLINRKSSRITPMMFEFNLIERAKQNRMRIVLPEGVEERILRAADILARREVADIIL
LGDADKVGAKVSELGIALDGVQIIQPNLSPKFEEYAQAYFELRKHKGVSIERARDTMNDV
TYFGTMMVHKGDAEGMVSGSINTTAHTIRPAFEFIKTKPGFSIVSSVFLMCLKDRVLAFG
DCAVNPNPTAEQLAEIAINSAHTARIFGIEPRVAMLSYSTGSSGKGADVEKVIEATRIAK
ERAPELLLEGPLQYDAAIDMDVARTKLPGSQVAGQATVFIFPDLNTGNNTYKAVQRAAGA
VAIGPVLQGLNKPVNDLSRGCTVPDIVNTVAITAIQAQAEKGLI