Protein Info for DvMF_1488 in Desulfovibrio vulgaris Miyazaki F
Annotation: protein of unknown function DUF1063 (RefSeq)
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 100% identical to Y1488_DESVM: UPF0597 protein DvMF_1488 (DvMF_1488) from Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637)
KEGG orthology group: None (inferred from 100% identity to dvm:DvMF_1488)Predicted SEED Role
"Inner membrane protein"
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See B8DLR0 at UniProt or InterPro
Protein Sequence (446 amino acids)
>DvMF_1488 protein of unknown function DUF1063 (RefSeq) (Desulfovibrio vulgaris Miyazaki F) MDIAAFFAAEVKPALGCTEPGAVALAAATAARHLPAPPERIHLRLSANIYKNGQSVGIPG AQGLRGNMLASALGALAGDADMGLQALAAVTADDVAAARALTERGAVTQEIVQDVPTVYA EAELYRPGHLVVAVVAGRHDRVAEVRHNGQVVYRAEDALGGDSLPPYMADLQRAAFGDLW NWADGIDADLARDLLRGAEMNLAVAEQGLANPWGLAVGHTLGMALRGGDCRNDSASDARA PGSCVPDACGPDISARVKATTAAAADVRMAGANQPVMSSAGSGNHGLTAIIPPALAARAW GRSDAELARALALSHLVTGAVKARTGRLTPLCGCAVAAGAGAAAALVRLADGTPAQAEQA VALVFSSVMGMICDGAKGGCALKVGTAAAEAWSAAQLALHGPGMTGAEGIVSPDFRASLR SLGEVSSLGFAAVDVAIIRLLERGVQ