Protein Info for DvMF_1161 in Desulfovibrio vulgaris Miyazaki F
Annotation: Hemolysin-type calcium-binding region (RefSeq)
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
KEGG orthology group: None (inferred from 100% identity to dvm:DvMF_1161)Predicted SEED Role
"FIG00602533: hypothetical protein"
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See B8DKF3 at UniProt or InterPro
Protein Sequence (2537 amino acids)
>DvMF_1161 Hemolysin-type calcium-binding region (RefSeq) (Desulfovibrio vulgaris Miyazaki F) MTRSPQGAAGRGAAPATDPVTLLLPAAGQELHFDANADSRFALGFPTDAAALERNGDDLV FSFPDGGRIVLSGFFEGNNADLLPEFSLPEGGTVSGYDFLAALEPDLLPAAGPGAGAGAA GGGVGDYSDDPGSLIASIDRLDPLTPFFWNSAVEPTLEAEGPLDTASGTLTFTLLPVNPD GSLASTLGGYEDNRPNQHLDPTGGNEQPLQLTVVFTPADNEVLTELSLTGFHEGTTISIG DPSFGPGSFVVTWPGQIVTLTPAQIAAGVFVRPPEDSSADMNLSATAAITDPDSGLSSVI SGTFTLVIDAVADKPALEATAQSAPAAEETPVTVHAAATFTDLDGSERHFIEVRDIPTDW VLTGALPQGWVIVDPVTHQPIATPVHDLGENTTYTLVIEVTDATTAGYGGVNSGDSASIG ADLTFNPRDWSDERWGDATPRDGEGGTTLTVAAVAQETVTDGELTTGNNISETTETVVVS RTEDHPDITPEGSTGHALTLVADETAGVQLHGGKGDVDPSTPSGLSASVNAVLAGLGLSA ADALSATRGSVTFNLHSDGSGEAAGNQASPSAVSIAWDAAQAVPEGTVLRTTSGADISLV VDENDPHVLRGVFTEGGVQHTAFVVVIADANLSGAGSATVTFVQYTPLAHGNTGNHDEGL DLPTFSFTVSDDEGDTASATVQVTVRDDGPTANADNNTFDEATVTAIDGNVLTGESSHGT DSTPDASGTDGWAGTDGGTGSGAVTGFSVVVGSTTYSGLALDTPVTILNPGTSVPAGTFT LHADGSYTFTRAPGQDIADSFTMKVNYTVKDGDGDTASSTLTLKLNAAPTLQLSLTGDSQ VYEDAAHGARVNPAGSTGGADGWNASGDNSHDIATYTVNWSYAGGRATGGTFAAGSFAFD VTLKDGSAKFDADTTNNTTMANTGDVTWAVPNGSGGWTAMTFNLTTADGRAALVAALNAD LAERYGSNAEGESYVRVSGVSADGKTLTFTVLDGCPLDNALPVRVAAIDDRLGDNNENYS VQIGNIHPAEDTPSSMDVVIAGQRSQTTTVYDEGNAAEGDGFRVGLESPVPAQESDGTAQ LTVVLYEKDGDLYTLNEGPAQNITVSLKFGATGDTAGADQDYFTTTSYTLKPTDWTWNAT EGRWEAKVPVTLADDRLSEGSESFTVKLTGVSGHEAGLNDAKTTATVTITDDTAAGHEAK LDGPSLEYFGPETVVREPVAPGESAEFTGGVNTTGTVNTAGYTIILTEVAAQDVVVWLKL GSAGLGTDFRTGTGLHAASDVSGLPGYADRPEGADFYVIVKAGAASARFTVDILHDHDTA ADGHGVDAGTDTVSWTIVDMQGSEVRFTPGDSGSTSTETIADDMRGPVVSITELDATQNT ADGTTTIKVGLGNDADGHATANEDVTVTLQVVGSDGSVHEYTVTIPAGQDTGSLTLPIPH TDYYHVRVVGTDGGETRHDDGFRFVDVTGPGGGGGTDHGRVTLGLAAHDLPEGASHDGVN QAVYTVTGSLSDNYRPLLNGDVSFTLKTFDNSAHSPADYTASNVTVTVDSGLMVLAKMSA TDSFSVDVLEDGTAVFTIPDLQFLGGTHAVSISFAPDGTAAIFVDGTAADGLIATLIEDH LLHGAVTVTGPTPIVSVVDDHRVEGDETYSVVLSNLSGNATVAGDGHGAMDSVTIIDNDA PTVLVTISDHTGAQTDTATEGQAHPLTVSVSLVDADGHPLALGDGPVTFQLTFSGTAEQG KDFAPYTTLVTIPDGGSAASVQVSLPDDYISDGNRTFVVTATPVANDPYNGYPAGFIGSG SSAEVTIIDHVNGPDVTLTASTTSISENNGSASFGISMDKAVEEDATFTVRVDFGPGMTE ADLAGVKIGSGSVSTAGITKVLGADNVTVTGWEFQVTVPKGSAGGGAFSVVTRNDYETEG KETFTVSLVDSHGGEIGSLGAAHTVTVNDTLDGPQVYLDTKGGYGTAEEGGSAELHIGMT KTAVADFSVDLTVQTPELLVPGSTATLWIKTASGDWQAVDTAVAIGTDGSLRVTVPAGTV DAKVQFDLAGNDMVGDKHTFTVTLDGVADGESAVRSVGSLTATFAEESHNAITYQFAGSA PDSNAVVTYTLKGVAFANVVSVTVDGQPVTITKVGSQATFTVTGAAGAAISDRITVTFKD ANAAADKAALTIGSSVRLSADIAVTDTTPGLMAAATLIALTGDEAALATGVLHTSDLLAG VEDPSPHGAGIGFGANASAADGMGHTGSGWTVDTASGELHYSLTGDGHYTYTAHDLGDAA DKVTATLTTHVQTGTVFDGSDDAHGIGLIVAGSAHGDTITGSSGDDRIHGGAGNDHLYGG SGNDVLHGGDGNDVLHGGDGNDYLDGGAGVNTLYGDAGDDTLVVHDTGGGTGVADGYLDN HDFAGLHGGDGYDTLLVQGEDVTLDFSRIAADTVTGIEAIDLTAHGAQHVTLSLDDLTSS DTGSLAVVFGETPVLSASTAASSEHAADGSVTFTAARGDSVTLTGLTSIQIASIGDLTDT HDHQLLIHQVVSSTSGG