Protein Info for DvMF_0931 in Desulfovibrio vulgaris Miyazaki F

Annotation: molybdopterin oxidoreductase (RefSeq)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 743 signal peptide" amino acids 1 to 32 (32 residues), see Phobius details PF10518: TAT_signal" amino acids 1 to 20 (20 residues), 22.9 bits, see alignment (E = 1.2e-08) PF04879: Molybdop_Fe4S4" amino acids 42 to 94 (53 residues), 38.3 bits, see alignment 2.2e-13 PF00384: Molybdopterin" amino acids 97 to 527 (431 residues), 156.9 bits, see alignment E=1.5e-49 PF01568: Molydop_binding" amino acids 625 to 721 (97 residues), 68.1 bits, see alignment E=1.3e-22

Best Hits

KEGG orthology group: None (inferred from 100% identity to dvm:DvMF_0931)

Predicted SEED Role

"Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.5.3)" (EC 1.8.5.3)

MetaCyc Pathways

Isozymes

Compare fitness of predicted isozymes for: 1.8.5.3

Use Curated BLAST to search for 1.8.5.3

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See B8DP54 at UniProt or InterPro

Protein Sequence (743 amino acids)

>DvMF_0931 molybdopterin oxidoreductase (RefSeq) (Desulfovibrio vulgaris Miyazaki F)
MSRRSFLKGLIASGALATLPCGLLLPRNASAAPFNKADFQIFRNACPRNCYDTCSIVTYV
RDGVVRFVEGAPESTYTAGGLCVKGYSYPRRVYSPDRIKYPMVQDGRGSGNWRRVSWDEA
MERIARKLLETKERDGNLLGLALTKYSGNFGITNYGVEGMMSSLGYTTRLVGTPCWPAGI
DAQNYDLGDMWCNDPEDMEKSRYVIIWGANPAWCSVHSMKYVYAARDRGAKIVVIDPVLT
QTSAKGDVAWQPETGSDGALALGMARHVLDLGLVDRDFVTSNAVGFEEFAAYLRQNVTVE
WAAEKSGIPADEIRRVAEEFATAKPATIWIGYGMQRHVNGGAAVRAIDALVAMTGNVGKV
GGGARYGHLQTWGFNYHAMIQKAPAGSTGFTGKAGPKGEFDVTAGAAAAAAYTDRALNIN
KTAQELLDAQNPPVRVLWSSCKNPFAQDFDRNKLEKAFNKLEMVVSVEQFFTETVRHSDI
VLPVTTLFEEWTVNASYWHYWVSLNEQAIAPMHEAKSNIEIAALLSKHMNRLSPGSCTYP
QDIDTREWMEKEFNKGVYDLLGITHWQDLRKGPAKAKMPSSASWSDRKFKTPSGKYEFRS
DLCASHGHKALPEYKEGRKPYAPYRLLTPHSKFAIHSQFANLDWMEEFQTEPFVYLNPAL
AKAKGIADLDTVRVFNPIGEVKLRAKITSTVPGDCLLMYEAWFRKLNFNVQNLVDDESAD
MGAYKTGAPGVAIHDQFADVARA