Protein Info for DvMF_0864 in Desulfovibrio vulgaris Miyazaki F

Annotation: UTP-GlnB uridylyltransferase, GlnD (RefSeq)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 900 967 PF08335: GlnD_UR_UTase" amino acids 215 to 347 (133 residues), 104.3 bits, see alignment E=8.3e-34 PF01966: HD" amino acids 546 to 616 (71 residues), 30.8 bits, see alignment 4.7e-11

Best Hits

KEGG orthology group: K00990, [protein-PII] uridylyltransferase [EC: 2.7.7.59] (inferred from 100% identity to dvm:DvMF_0864)

Predicted SEED Role

"[Protein-PII] uridylyltransferase (EC 2.7.7.59)" in subsystem Ammonia assimilation (EC 2.7.7.59)

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.7.7.59

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See B8DNY8 at UniProt or InterPro

Protein Sequence (967 amino acids)

>DvMF_0864 UTP-GlnB uridylyltransferase, GlnD (RefSeq) (Desulfovibrio vulgaris Miyazaki F)
MTQAHGPSSSAPAGSSGTPRDAASVLREGRAALLEGLDASPPPTDAAPQENACAARPDAH
CRDTAPPFSSMGASRFERAYSRLLDDYFRLRFAELRGGHDKVALVAVGGYGREELCLGSD
IDILILCGRSIPPQAIDLAQPLFLPLWDAGYTLGHGFRTIGDCVKLAAKDHKVLASLLDA
RLITGNEALFREMVDRLNDKVLPRRGASFLSWNDEEHERRRASHGDGAVLLEPNLKEGLG
GLRDYHRILWLGRIRNEAGTVEEILAQAGFSSSDAALLRESVGFLHDVRNLLHHLSHRKN
DQLFLDLQPEIAARLGFRECGNLLAVECFLGRLHRCMSHIKALSAAFRGMPGGPVHPDQP
CPEVEGPVVMAGGTLHICLPDPAVVTPGLALSAFVRAAQWPGPDAPAPDWNTRKAMEQAL
QQALSGKEGALSGAEVGAALMRILGSGKAFPVLGHMDETGLLPAILPAYAEARDRVQFDG
FHTYPVGMHTLFVIRQLESLANEDFEPFSGFWRGGCLSVPEGQAGMGEGAARMPAQPSGH
DADAARDRLCLLLAALLHDLGKGGADASHHSEVGAEMAMRLLSEWGAPPEIIDDVVFLVL
HHLLLIRTAQRRDLNDESVVAQCAGTVGSLRRLNMLYLLTHADSMATGHKAWNRWTASLL
YELHGKVANMLRDGQLAGTQTAQAIARTRDMARALVRERQSALHYTLETAGLYLDAMPSR
YLLAMPPEDIVRHMSLVYQLNRDVAESRRRLPEDRAERGVVVLEGRPLHGGRDSELWEVL
VAARDQSGLFATIAGVLSLHGLNVFGADAYVWSDGTVLDIFHVTAPPDPLYARDFWGKVR
GAVHFALTGKLSLDYRLEQARASNALKHKVPSVLLDAVRRPPEVRIDNELSDFHTVVEVF
APDRPALLYDVARVLQALQLDILFAKIATLGNRTSDSFSVRTVYGQKITDEQQMDEVRAA
LLHVVSQ